Populus trichocarpa (black cottonwood): 7482225
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Entry
7482225 CDS
T01077
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
7482225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7482225
03110 Chaperones and folding catalysts [BR:
pop03110
]
7482225
03029 Mitochondrial biogenesis [BR:
pop03029
]
7482225
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7482225
Enzymes [BR:
pop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
7482225
Messenger RNA biogenesis [BR:
pop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
7482225
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP60 / Chaperonin
7482225
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
7482225
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7482225
Exosomal proteins of other body fluids (saliva and urine)
7482225
Exosomal proteins of breast cancer cells
7482225
Exosomal proteins of colorectal cancer cells
7482225
Exosomal proteins of bladder cancer cells
7482225
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DD_K
Motif
Other DBs
NCBI-GeneID:
7482225
NCBI-ProteinID:
XP_024465370
LinkDB
All DBs
Position
10:complement(15050743..15056356)
Genome browser
AA seq
592 aa
AA seq
DB search
MACSPSLISAISLTNPTRLKRVSSPSMLSPKAMAKEIYFNHDGSTTKKLLAGVEMVSELL
GVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNNLAGD
GSTTSVVLAHGLIAEGQKVIASGMNPVQIARGIVKTSEALVSELKLMSREVENDELADVA
AVSAGNDYTVGNMISDALQQVGRRGVVTIEKGRCTENILEIVEGMQFDRGYLSPYFVTDR
QRMVVEFHNCKLLLVDKKIQNAKEVFKILDNAVKEMYPIVIVAEDVDQEALAPIIRNKLK
GLLKGAAIKAPAFGERKSHYLDDIAILTGGTVIRDDMGLKLEKAGKEVLGTATKVVITKD
STLIVTDGSTREAVEKRVSQICSLVENTEEKFQKKILNERIARLSGGIAILQVGAQTQVE
LKDKLLRIEDALNATKAAIEEGVVVGGGCSLLRLSTKVDGIKELLDNEEQKIGAEIFKRA
LSYPARLIAKNAGVNGNVVINQVLSNADIRYGYNAATDTYEDLITAGIIDPTKVVRCCLE
HATSVAKTFLTSDAVVVDIKESDPLPMRKRMPPVAPPPMPKSPGVGPVGVYL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcatgctctccatctctaatctctgcaatatctctcactaacccaacaaggctcaag
agggtctcctctccttctatgttaagcccgaaagccatggccaaggaaatttacttcaac
catgatggttcaaccacgaagaaacttctggcaggggtggagatggtgtcagagttatta
ggagtgactttaggaccgaaaggaaggaatgtggtgttgcaaaacaagtatggacctccc
aagattgttaatgatggagaaactgtcctcaaagagattgaactggaggatcccttggag
aatgttggagtaaaattggtgaggcaagctggtgcgaaaacaaataaccttgctggtgat
ggttcgacaacatctgtggttcttgctcatggtttaatcgctgagggtcaaaaggtgatt
gcatctggcatgaatcctgttcaaattgctcgtgggattgtgaaaacctcggaagctctt
gtatctgaactcaaattgatgtcgagggaggttgagaacgatgagcttgcagatgttgct
gcagttagcgcagggaatgattatacagtgggaaacatgatatccgatgcacttcaacaa
gtgggaagaaggggagtagtcacaattgagaaaggaaggtgtactgagaacatcctagaa
attgtagaaggaatgcaatttgatcgtggatatttgtctccttacttcgtaactgatcgg
caaagaatggtagtggagttccacaactgcaagctactcttggttgacaaaaaaatacag
aatgcaaaggaggtgttcaaaatattggataatgcagttaaagagatgtacccaattgta
atagttgcagaggatgtggaccaggaagctctggctccaatcattaggaacaaactcaag
ggtctattgaagggagctgctattaaagctcctgcctttggtgaacggaagagccactac
ttggatgacatcgctatcttgacaggaggcactgtaattagagatgatatggggctgaag
ctagaaaaggctgggaaggaggtgttgggcactgctactaaggtggtgataacaaaagat
tctacgttgatagtaactgatgggagcactcgagaagctgtggagaaaagggtttctcag
atatgtagtcttgttgagaacactgaagaaaaatttcaaaagaaaatattgaatgaaaga
atagcaaggttatctggagggattgctattctgcaggtaggagcacaaacacaagtcgag
ttgaaggacaaactgctgagaattgaggatgctttaaatgcaaccaaggcagcaattgag
gaaggtgtagtagtgggaggtggttgtagccttttgaggctatcaactaaggtggatggt
attaaagaacttttggataatgaagagcagaagattggagctgagatcttcaaaagagct
ttgagctatcctgcacgattaatagctaagaatgcaggtgtaaatggaaatgtcgtcata
aaccaggttttgtcaaatgctgatataagatatggatacaatgctgcaacagacacttac
gaggatttgataactgctggaattatagatcccacaaaggtggttagatgttgtttggag
catgcaacatcggtggccaagacattcctgacatccgatgctgtcgtagttgacatcaag
gaatcggatcccctcccaatgaggaaacgaatgccaccagtagcccctcctcctatgcca
aaatccccaggtgttggaccagttggcgtatacttgtag
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