Populus trichocarpa (black cottonwood): 7482230
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Entry
7482230 CDS
T01077
Name
(RefSeq) protein PHYLLO, chloroplastic isoform X1
KO
K14759
isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:
5.4.4.2
2.2.1.9
4.2.99.20
4.2.1.113
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00130
Ubiquinone and other terpenoid-quinone biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01240
Biosynthesis of cofactors
Module
pop_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
7482230
Enzymes [BR:
pop01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
7482230
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.113 o-succinylbenzoate synthase
7482230
4.2.99 Other carbon-oxygen lyases
4.2.99.20 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
7482230
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
7482230
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MR_MLE_C
TPP_enzyme_M_2
Abhydrolase_6
Abhydrolase_1
TPP_enzyme_N
Hydrolase_4
TPP_enzyme_C
Abhydrolase_2
Thioesterase
MenC_N
Abhydrolase_3
BAAT_C
DUF676
Ndr
DUF726
DLH
DUF900
LIDHydrolase
Abhydrolase_11
Ser_hydrolase
Motif
Other DBs
NCBI-GeneID:
7482230
NCBI-ProteinID:
XP_024466567
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All DBs
Position
10:15077185..15094023
Genome browser
AA seq
1716 aa
AA seq
DB search
MKPHILLLTNNLPLPSPNLPFGTRKSLPLAFLSRNTSIHFPRFQSPKFKVVEAVRFDCPV
TDVTELEGEDCELVLETCITRTLPPALTLERGIESIKAAVDDLKSNPPCSLHGVFRFQVA
VPPSPKALNWFCSLPESDGVFPRFFLSKETEDASCKKLYLHRTRGVFGLGSAICFEASSY
RAPEKLKRIRRYLSSDSTHIMTYGFMDINFNKESSSIKHEAGSFYFLIPEVELDEQEEAS
ILVITLAWDENSCWTFEQAIQSFESSIDQASFCFWPDTERCYSKCIKSTFRNFNLMEAKT
FQMACTDALFLDRRDYQADTTELVSPFSWTIFSTQFCFRLSPVVGVSSNMLDDAGETSYS
LQDQSNINAVWASLIVEECSRLGIMYFCVAPGSRSSPLAIAASTHPLTTCISCFDERSLA
FHAVGYSKGSHKPAVIITSSGTAVSNLLPAVVEASQDFVPLLLLTADRPPELLDAGANQA
INQVNHFGSFVRFTFSLPAPTDNIPARMVLTTIDSAVHWATSLPYGPVHINCPFREPLDD
SSDNWMLSCLKGLDIWMSGAEPFTKYIQLQNSLACKDGACVPMAEVLEIIKGTDRGLLLL
GAIHTEDEIWAALILAKHLNWPVVADILSGLRLRKLLPSLPEIEENVLFVDHLDHALLSE
WVRGWIRFDVIVQIGSRITSKRVSQMMEECFPCTYILVDNHPCRHDPSHFVTHRVQCSIR
QFADSLMKAQFSHRNSKWCCFLRVLNTMVAWDISFQINAENSLTEPHVAHVITEALSAES
ALFVGNSMVIRDADMYGHNCKTHAHSIAHMMLDSKLPYLGIRVAGNRGASGIDGLLSTAI
GFAVGCNKQVLCLVGDVSMLHDTNGLAILTQRVSRKPMRILVINNHGGAIFSLLPIADKT
DPRILDQYFYTSHRISIHKLCAAHSVRHLRVKTKVQLQEALLKFEHEKTDCVIEVESGIG
ANSTFHSTLRKSAQQAADHALSILSRLSVRVSISDGLFLCKIHKMDFSLYRIQLCAPPTS
SSVDHHQNEFHREGYILSVSLEDGSVGYGEVAPLEIHKENLADVEEQLLFLLHVIKGIKI
NVSLPILKGSFTSWIWSNLGIMECSIFPSVRCGLEMAVLNAIAVSQGSSFISMLQPWMIN
EEIYEKSSVKICALIDSNGTPTEVAYIASSLVEEGFTAIKLKVARRADPIQDATVICKVR
KEVGPCIELRADANRKWTYEEAIQFGFLVKDCDLQYIEEPVENVDDIVKFCEETGLPAAL
DETIDNFQESHLKMLAKYTHPGIVAVVIKPSVVGGFEKAALIARWAQKHGKMAVVSAAFE
SGLGLSTYILFSYYLEQLNAVYTVMNRETRPSIAHGLGTYRWLKQDVTAIPLGIHYDPCK
GFVGASVAASIQLLQNFQVNNNVIHKTFNEEQVHRYHLTVNSKNFSYSIKVHEVGQESND
NVVIFLHGFLGTGEDWVPIMKAISRSAKCISIDLPGHGGSKIQNHGSEGAQEEATLSIEI
VADVLYKLIQGITPFKVTLVGYSMGARIALHMALRLSHKIDGAVIISGSPGLKDTMARKI
RQAKDDSRADFLVAYGLELFLDSWYAGELWKSLRSHPHFKEIVAGRLVHEDVQSLAKALS
GLSTGSQLPLWEDLKRCDLPLLLIVGEKDAKFKSIAQKMFHEVVQDRKGEDRRGNNICEI
LEVPNCGHAVHLENPLPIISAMRKFLTRGRSSRAQQ
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctcacatattattacttacaaacaatctccctttaccatctccaaatcttccc
tttggaacaagaaagtctctccctctcgcatttctcagcagaaacacttccattcacttc
cctcgctttcaaagccctaaatttaaggttgttgaagcggtgagatttgattgtcccgta
acggacgttactgaattggaaggcgaggattgtgagttggtgcttgagacttgcatcacg
cgcacattgcctccggcattgacgctggagcgagggatagagagcattaaggctgccgtg
gatgatttaaagtcgaatcctccgtgttctcttcacggtgttttcagatttcaggttgct
gtgccgccgagtccaaaagctttgaattggttctgctcgctaccggagtcggatggtgtg
ttccctcgtttttttctaagcaaggagacagaggatgcgtcgtgcaaaaaactctatttg
cataggactcgtggagttttcgggcttggatcagcaatttgctttgaagcgtcctcttac
cgtgctccagaaaagctgaagaggatcagaagatatctctcaagtgattccacccatata
atgacttatggttttatggatattaatttcaacaaggagtcatcttcaatcaagcatgag
gctggttcgttttacttcttgattcctgaggttgagttagatgagcaagaagaagcatct
attcttgtcataactttggcatgggatgaaaattcctgctggacttttgaacaagcaatt
caatcttttgagtcatccattgaccaggccagtttttgcttttggccagacacagagaga
tgctattccaagtgcataaaatctaccttcagaaatttcaatttgatggaggctaaaaca
ttccagatggcttgtacagatgctctgtttttggacagaagggattatcaggctgacacc
acagaactggtatcccctttttcctggaccatattttccactcagttttgtttcaggctt
tcaccagtggtaggcgtttcgagtaacatgttggatgatgctggtgaaacaagttactct
ctgcaagatcaatcaaatatcaatgctgtttgggcttcacttatagtggaagaatgttct
cgtcttggtataatgtacttttgtgtagctccaggctcaagatcatcgcctcttgccatc
gctgcttccactcatcccctaacaacatgtatttcatgctttgatgagcgctctcttgca
tttcatgctgttggttattcaaaggggtctcataaaccagcagtcatcataacatcatca
ggcactgcagtttcaaatcttcttcctgctgttgtggaagctagtcaggattttgtgcca
cttctattgctgaccgcagatcgtcctcctgagcttcttgatgctggggcaaaccaagca
attaatcaggtgaaccattttggttcttttgtgaggttcaccttcagtcttcctgcacct
actgataatattcctgcgcggatggtgcttacgacaattgactccgctgtgcattgggca
acctctttgccatatggccctgttcatattaattgtcctttcagagagcctctggatgat
agttcagacaattggatgttaagctgtttaaaaggattggatatttggatgtctggtgcg
gaaccattcactaaatatattcaattgcaaaattctcttgcatgtaaagatggtgcttgt
gtcccaatggcagaggttcttgaaataattaaagggactgatagagggcttttacttctt
ggtgcaattcacacagaagatgaaatatgggcggcgcttattttggctaaacaccttaat
tggcctgttgtagctgacatcttatcagggctaagattaagaaagctccttccttctctt
cctgaaattgaagagaatgttttatttgttgatcatctagaccatgctttactgtcggaa
tgggtcaggggttggattcgttttgatgtgattgttcagattggaagccgaataacaagc
aagcgtgttagtcaaatgatggaagaatgttttccgtgcacatatatcttagttgacaac
cacccgtgccgtcacgatccatcacattttgtaacacacagagtgcagtgctccattcgt
cagtttgctgacagcttaatgaaagctcaattttcacacaggaacagcaaatggtgttgt
tttctacgagttttgaatacaatggttgcctgggatatatcatttcaaattaacgcagag
aactcattaaccgagcctcatgttgcacatgtaattacagaagctctttcagccgagtct
gctctttttgttggcaacagcatggtaatacgcgatgcagacatgtatggacacaattgt
aaaactcatgctcatagcattgcacatatgatgttagactcaaaacttccatatcttggg
ataagagtggctggcaacaggggagctagtggtattgatggtttgcttagcacagcaatt
ggttttgctgttggatgcaataaacaagtgctttgtttggttggagatgtttctatgctt
catgatacaaatggcttggcaattttgactcagagggtgtcaaggaaaccaatgaggata
cttgtgataaacaatcatggtggagcaattttcagtctccttcctattgcagataaaact
gaccctcgaatattggatcagtatttctacacttcccatagaatatcaattcataaactt
tgtgcggcacacagtgtgagacatttacgagtgaagacgaaggtgcaacttcaagaggct
ttacttaaatttgaacatgagaagacagattgtgtaattgaagtggagagcggcattggt
gccaattcaaccttccacagtactttaagaaaatctgcacagcaagcagcagatcatgct
ttaagcattctctcaaggctttctgttcgagtttccatttcagatgggttatttctctgc
aagatccataaaatggatttttcactgtacagaattcaactctgtgctcctcctacctcg
agctctgttgatcatcatcagaatgagttccatagggaaggttatattttatccgtgtct
cttgaagatggaagtgttgggtatggtgaggttgcacctcttgaaatccacaaagaaaat
ctggcggatgtagaagagcagcttctatttcttcttcatgtcattaaaggaatcaagatt
aatgtttcccttcccattctgaaaggctctttcacttcttggatatggagcaacttagga
attatggaatgttcaatctttccaagtgttagatgtggtcttgaaatggctgtcttgaac
gccatagcagtaagtcaaggttccagttttataagtatgcttcaaccttggatgataaat
gaggaaatttatgaaaagtcaagcgttaagatatgtgcccttattgattctaacgggact
cccactgaggttgcttatattgcttcctcacttgttgaagaaggattcactgcaataaaa
ctcaaagttgcacgtcgggcagatcccattcaagatgctacagttatatgcaaagtacga
aaggaagttggtccatgtattgaactccgtgcggatgccaacagaaaatggacctatgaa
gaagctatccagtttggcttccttgtaaaagattgtgacctacaatatattgaggaacct
gttgagaatgttgatgatattgtgaagttttgtgaagaaactggcttacctgcagctctt
gatgaaactatcgacaattttcaagaaagtcatcttaaaatgcttgcgaagtatactcac
cctggaatagttgctgtggttatcaaaccaagtgttgttggtgggtttgaaaaggcagca
ttaattgcacgatgggcacagaagcatggaaaaatggctgttgttagtgctgcatttgaa
agtggcttaggtttgtcaacttatattctattctcctattacctggagcagctgaatgct
gtttatacagttatgaaccgtgaaaccaggccatctatagcccatggtcttggaacttat
agatggcttaaacaagatgtcacagctatacctcttgggattcattatgatccatgtaaa
ggctttgtcggagcatctgttgctgcttccattcaactcctacagaactttcaagtcaat
aacaatgttattcacaaaacttttaatgaagagcaagttcatagatatcatttgacagtg
aattcaaagaatttttcctactccatcaaagttcatgaagttggacaagaaagcaatgat
aatgttgttatatttcttcatggatttcttggaactggtgaagattgggtccccatcatg
aaggccatctcaagatcagcaaaatgcatttcaattgatcttccgggacatgggggatca
aaaatacaaaatcatggtagtgagggagcccaagaggaagcaactttgtcaattgaaata
gttgcagatgtattatataagttgattcaaggcataactccttttaaggttaccctggtt
ggatattctatgggagctaggattgcattgcacatggcactaaggcttagtcataagatt
gatggagctgttataatatctggtagccctggcctgaaggatacaatggcaagaaaaatc
cgtcaggctaaagatgattctagggcagacttccttgttgcctatggtttagaactcttt
cttgattcctggtatgctggagagctctggaagagcctgagaagtcatccccattttaag
gaaatagttgctggccgcttggtgcacgaggatgtccaaagccttgcaaaagctctgtca
ggcctcagcactgggagccagctgccattgtgggaagacttgaagcgatgtgatttgccc
cttttactcattgttggagagaaagatgcgaagttcaagtcaattgctcaaaaaatgttc
catgaagttgtccaagataggaaaggtgaagaccgcagggggaacaatatttgtgagata
cttgaggttcccaattgtggtcatgctgttcatttggaaaaccctcttcctattattagt
gccatgaggaaatttttgaccagaggaaggagttccagagcacaacagtaa
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integrated database retrieval system
