Populus trichocarpa (black cottonwood): 7482296
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Entry
7482296 CDS
T01077
Name
(RefSeq) notchless protein homolog
KO
K14855
ribosome assembly protein 4
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7482296
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
7482296
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_Aladin
Beta-prop_TEP1_C
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_SCAP
ASA1
Beta-prop_WDR75_1st
NLE
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR41
CFAP251_N
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
WD40_RFWD3
Tricorn_2nd
Beta-prop_SPT8
PD40
eIF2A
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
PAC11
Tricorn_N
Ge1_WD40
RMC1_N
WDR54
Beta-prop_Vps41
Beta-prop_ELP1_1st
Beta-prop_WDR11_2nd
TRAP-delta
Motif
Other DBs
NCBI-GeneID:
7482296
NCBI-ProteinID:
XP_002313318
UniProt:
B9HNS3
LinkDB
All DBs
Position
9:complement(6062121..6068235)
Genome browser
AA seq
471 aa
AA seq
DB search
MEDEAVNNVMCQFTDPEGTPLGAPLYLPQNAGPQQLQQIVNKLLNNEEKLPYAFYISDQE
LVVPLETYLQKNKVSVEKVLAIVCQPQAIFRIRPVNRCSATIAGHAEAVLSVAFSPDGRQ
LASGSGDTTVRLWDLNTQTPMFTCTGHKNWVLCIAWSPDGKHLVSGSKAGELQCWDPQTG
KPSGNQLVGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDISLRKSVICLSGHTLA
ITCVKWGGDGVIYTGSQDCTIKVWETSQGKLIRELKGHGHWVNSLALSTEYVLRTGAFDH
TGKTHSSPEEMKKVALERYNKMKGNAPERLVSGSDDFTMFLWEPAVSKHPKTRMTGHQQL
VNHVYFSPDGNWVASASFDKSVKLWNGITGKFVAAFRGHVGPVYQISWSADSRLLLSGSK
DSTLKIWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaagcagtgaacaatgttatgtgccaattcacagacccagaagggacgcca
cttggagctcctctatatcttcctcaaaacgctggtccacaacaacttcaacaaatcgtt
aataagcttcttaacaatgaagagaagttaccgtatgctttttacatatcggatcaagag
cttgttgtgccacttgaaacttacttacagaaaaacaaagtttcggtggagaaggtactg
gcgattgtttgtcaaccacaagctattttccgaattcgtccagttaatcgttgttcagcg
actattgctggtcatgcggaagctgtactttcagttgcctttagtcccgatgggcggcag
ctggccagtggctctggggataccactgttcgtctatgggaccttaatacccagacaccg
atgtttacctgtacaggacataagaattgggttctttgcattgcatggtcaccagatggt
aagcatctggtgagtgggagcaaggctggagaacttcagtgttgggatcctcagacggga
aagccatcagggaatcagcttgtgggccacaagaaatggattactggcatctcttgggaa
ccagtccatttgaatgctccttgccgtcgctttgttagtgctagcaaagatggagatgca
cgcatatgggacatatcactaagaaaatctgttatttgtcttagtggccacacacttgca
ataacttgtgtaaaatggggtggagatggagtaatttatactggctcccaggattgtacc
attaaagtgtgggaaacatcacaagggaagcttattcgtgaattgaagggtcatgggcat
tgggttaactctctcgcattgagcactgagtatgttcttcgcacaggagcttttgatcat
acaggaaaaacacattcttctccagaggaaatgaagaaggttgctctggaaaggtacaat
aaaatgaaaggcaatgctcctgaaagactagtttcaggttctgatgattttaccatgttc
ctctgggaacccgctgtcagcaaacaccctaaaactcgcatgacaggtcatcaacagctt
gtaaatcatgtatacttctcacctgatgggaattgggtagctagtgcatcatttgataaa
tctgtgaagctatggaatggcattactgggaaatttgttgctgcttttcgtggccatgtc
ggacctgtttatcagatcagctggtccgcagacagtaggcttcttttaagtgggagcaaa
gactctacgctgaagatttgggatatacgaacacagaaattaaagcaagatcttcctggc
catgcagatgaggtatttgccgttgattggagtccagatggtgagaaagtagcttctggt
ggtaaggatagagtattgaaattatggatgggctaa
DBGET
integrated database retrieval system