Populus trichocarpa (black cottonwood): 7482305
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Entry
7482305 CDS
T01077
Name
(RefSeq) 50S ribosomal protein L1, chloroplastic
KO
K02863
large subunit ribosomal protein L1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
7482305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pop03011
]
7482305
Ribosome [BR:
pop03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Large subunit
7482305
Bacteria
7482305
Archaea
7482305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L1
Motif
Other DBs
NCBI-GeneID:
7482305
NCBI-ProteinID:
XP_006379078
UniProt:
A9PFW5
LinkDB
All DBs
Position
9:6013949..6019016
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AA seq
355 aa
AA seq
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MATTTTCTSTTSSFMLTYATSTVHPQDLTPSLLSFKPQIFSVCPLISDRKSSNRINFYSQ
TEAKSRPCRVVVAAALAAEAEVGEEVEETEGEGGGVATATVTPTKPKKGKAALPLKRDRT
RSKRFLEIQKLRETKKEYDLGTAISMLKKTANTKFVESVEAHFRLNIDPKYNDQQLRATV
NLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIQQIKGGFMQFDKLIASPDMMPK
VASLGKILGPRGLMPNPKAGTVTTDIPQAIAEFKRGKVEYRADKTGIVHIPFGKADFSEE
DLLVNLLAAVKSAEANKPSGAKGVYWKSAHICSSMGPSIRLNTREMLEYKLPSNV
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacaacaacatgtacttctacaacatcttccttcatgctaacgtacgccacc
tccacagtacacccacaagacctaaccccatctcttctttcttttaagccccaaattttc
tctgtctgcccattgatctcagacaggaaatcaagcaataggatcaacttttatagccaa
acagaggcaaagtctagaccttgcagagtggttgtggctgctgctttggctgcagaggcg
gaggtgggtgaggaggtggaagagacagagggagaaggaggtggtgtggcaactgctaca
gttactcctactaagcctaagaaagggaaggctgcgttgcctttaaagagagacagaaca
aggtctaagagattcttggaaattcaaaaattgagggaaacaaaaaaggagtacgacctg
gggacagcaatatctatgctaaagaaaacagcaaacacaaagtttgttgaaagtgttgaa
gctcattttcgtcttaacatcgatcccaaatataacgaccaacagctgagagcaacagta
aatttgcccaagggaacaggacaaactgttaaagttgcagtgctcacccaaggtgaaaag
ttcgatgaagcaaaaaatgcaggagcagatttggttggtggtgaggacctgatacaacaa
ataaagggaggatttatgcagtttgataaattaattgcatctccggatatgatgcctaag
gttgccagcttaggtaagattctaggaccacgaggactcatgccaaatccaaaagctggt
actgttacaactgacatacctcaggcaatagctgaattcaaaagggggaaagttgagtac
agagcagataaaactgggattgttcacatacctttcgggaaagctgatttctcagaggaa
gacctccttgtaaacttgctagctgcggtaaaatcagcagaagcaaacaagccatcaggt
gcgaagggagtgtactggaaaagcgcacatatatgctcatcaatggggccttccattcgg
ttaaatacaagggagatgctcgaatacaagcttccgtcgaatgtttga
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