Populus trichocarpa (black cottonwood): 7482353
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Entry
7482353 CDS
T01077
Name
(RefSeq) T-complex protein 1 subunit theta
KO
K09500
T-complex protein 1 subunit theta
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
7482353
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pop03037
]
7482353
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP60 / Chaperonin
7482353
Cilium and associated proteins [BR:
pop03037
]
Primary cilia and associated proteins
BBS-CCT complex
7482353
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Glyco_hydro_3_C
Motif
Other DBs
NCBI-GeneID:
7482353
NCBI-ProteinID:
XP_002319163
UniProt:
B9I5Y4
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Position
13:4273699..4278287
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AA seq
545 aa
AA seq
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MGFSMQPYGMQSMLKEGHKHLSGLDEAVLKNIDACKQLSAITRTSLGPNGMNKMVINHLD
KLFVTNDAATIVNELEVQHPAAKILVLAGKAQQEEIGDGANLTISFAGEMLQNADELIRM
GLHPSEIISGYNKAINKAIEILSELVEPGSENMDVRNKEQVICRMKAAVASKQFGQEDIL
CNLIADACIQVCPKNPVNFNVDNVRVAKLVGGGLINSSIVRGMVLKGDTVGTIKRVEKAK
VAVFAGGVDTSATETKGTVLIHSAEQLENYAKTEEAKVEELIKAVAETGAKVIVSGAAVG
EMALHFCERYKLMVLKISSKFELRRFCRTTGAVAILKLSPPSPDDLGCVDSISVEEIGGA
RVTIVRNEEGGNSVCTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIIPGGAATEIE
LAKRLREFSFKETGLDQYAIAKFAESFEMIPKTLAENAGLNAMEIISSLYAEHASGNTKV
GIDLEEGVFKDVSTTNIWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDAAPG
GMDED
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggggttctcaatgcaaccatatggaatgcaatcaatgttaaaagaaggacacaagcat
ttatcaggtctcgatgaagccgttctcaaaaacatcgatgcttgtaagcagttgtctgct
atcactcgcacttctctcggccccaacggtatgaataagatggttattaatcacttggac
aaactctttgtcaccaatgatgctgccactattgtaaatgaactcgaggttcagcatcca
gctgccaagattttggtcttagctggcaaggcccaacaagaggaaattggggatggagct
aacttgaccatctcttttgctggagagatgcttcaaaatgcggacgagcttattaggatg
ggcctgcaccccagtgagatcatcagcggttacaataaagcaatcaacaaggcaattgaa
atcttaagcgaactggtggagccaggttctgaaaacatggatgtgaggaataaggagcaa
gttatttgtcggatgaaggctgctgttgctagcaagcaattcggacaagaagatattcta
tgtaacctcattgccgatgcgtgcatccaggtatgtcccaagaacccagtaaacttcaat
gtggacaatgtccgggttgcaaagcttgtgggaggaggtttgatcaattcttcaatagtc
cgtggtatggttttgaaaggtgatactgtgggaaccataaagagagtggagaaggcaaag
gttgctgtgtttgctggtggtgttgatacctctgcaactgaaaccaagggaaccgtccta
attcactctgctgaacagctagagaattatgctaaaactgaagaagctaaagttgaggag
ctcattaaggcagtggcagaaactggtgccaaagtaattgttagcggggcagctgttgga
gagatggcattacatttctgtgaacgttacaaactcatggttctgaagataagctcaaag
tttgaactgagaagattttgccgcaccactggcgctgttgctatcctgaagcttagtcca
cccagcccagatgacttgggatgtgtagattctatttcggttgaggaaattggtggtgct
agggtcactattgtgagaaatgaagaaggtggcaactctgtatgcactgtggtgctacga
ggaagtacagatagcatactagatgaccttgaaagagctgttgatgatggagtcaatact
tacaaggcaatgtgtagggacagtcgaataatacctggaggggcagctactgagattgag
ttggccaaaagacttagagaattctcatttaaagaaacaggattggatcagtatgctatt
gcaaagtttgctgaaagttttgagatgatacctaaaacactggctgagaatgctggactc
aatgcaatggagatcatatcttctctctatgctgaacatgcttctggaaataccaaagtg
ggcatcgacttggaggaaggtgttttcaaggatgtatcaaccactaatatctgggacctc
tatgtcacaaagttttttgctctcaaatatgctgcagatgctgcctgtactgtattgcgc
gtggaccagattataatggcaaaaccagctggtggtccaaggagagatgctgcacctgga
gggatggatgaagattag
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