Populus trichocarpa (black cottonwood): 7482392
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Entry
7482392 CDS
T01077
Name
(RefSeq) presenilin-like protein At1g08700
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
7482392
Peptidases and inhibitors [BR:
pop01002
]
Aspartic peptidases
Family A22: presenilin family
7482392
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Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
7482392
NCBI-ProteinID:
XP_002319736
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Position
13:complement(5312520..5314971)
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AA seq
453 aa
AA seq
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MQSSILDSIGVEIIGVMSPVSICMLLVVLIVYSLSSSNPFSAASAPPIRTAANLVYLESS
SDSTSQKFEGALLNALVFVILIAVVTFFLVLLYYYNCTGFLKNYMRFSAFFVLGTMGGSI
FLSMIQHFSIPVDSITCFILLFNFTIVGVMSLFSSGVPIFVRQGYMVALGIFVAAWFTKL
PEWTTWALLVALALYDLVAVLAPGGPLKMLVELAQTRDEELPALVYEARPTVSQNGIVQG
RSLDLLVGGVSDSRSVEMQAMSSNNVDQNENQNRANSGYTVIQDTNFGNMEGVQRRDEGG
RSLSVDILHERHSSSSSSSEYSTVVGNRDSEIVVDEERSPLVGAPEMRNGGEQMRDGLEN
SDVSSRGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVWRQALPA
LPISIALGVIFYFLTRLLMEPYIVGTATQLMMF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgagcattttagattcaatcggtgtcgaaattattggcgtcatgtccccagtc
tcaatctgcatgctccttgttgttctcatcgtctactctctctcctcttcgaaccctttc
tctgcggcctccgctccgccgatccgcaccgctgctaacctcgtctacctcgagagctcc
tccgactcaacctcccagaaattcgaaggcgctcttttaaacgcgctcgtgtttgttatt
ctcattgccgtggttactttttttcttgttctcttgtattattacaattgtactggattc
ttgaagaattacatgcggttctcggcttttttcgtgctaggtacaatgggcggctcaatt
tttctatcaatgattcagcatttctcaattcctgttgattcaattacctgttttattctg
ttgtttaattttacaattgtgggcgtaatgtcattgttttcaagtggggtaccgattttt
gtgaggcaaggatatatggtggcattggggatatttgtggcagcttggtttactaagtta
ccagagtggactacgtgggctttgctggtagctttggcactatatgatttggtggcagtt
ctggcacctggtgggccacttaagatgttggtggagttggctcagactcgagatgaggaa
cttccagcattggtttacgaggctcgtccaacagtttcacaaaatgggattgtgcagggt
cggagtttggaccttctggttggtggtgtttcggactctcggtcagtggagatgcaagct
atgtcaagtaacaacgtggatcaaaatgagaatcaaaatcgtgcaaattctggctatact
gttattcaggataccaattttggaaacatggaaggtgtacaaaggagagatgaagggggg
aggtccttgtcagtggatattttgcatgagaggcactcatctagcagcagctcatcagag
tattcaactgtggttggaaatcgtgactctgagatagttgtcgatgaggaaaggtctccg
cttgttggtgcaccagaaatgaggaatgggggggaacagatgagggatggcttggagaat
tctgatgtttctagtagaggtattaaacttggtcttggagattttgtgttttacagcgtc
cttgtgggcagggctgcaatgtatgatctgatgacagtatatgcatgttaccttgcaatt
atttctggacttggctgtacccttattttgttgtcagtgtggcgccaggctctgccagct
ctccctatttcaatagctttgggtgtcatcttttacttcttgacccggttattgatggaa
ccttatattgttgggacagcaacacagctgatgatgttctaa
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