KEGG   Populus trichocarpa (black cottonwood): 7482463
Entry
7482463           CDS       T01077                                 
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04145  Phagosome
pop04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    7482463
  09142 Cell motility
   04814 Motor proteins
    7482463
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    7482463
   03036 Chromosome and associated proteins [BR:pop03036]
    7482463
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pop04812]
    7482463
   04147 Exosome [BR:pop04147]
    7482463
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     7482463
Chromosome and associated proteins [BR:pop03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     7482463
Cytoskeleton proteins [BR:pop04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    7482463
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   7482463
  Exosomal proteins of other body fluids (saliva and urine)
   7482463
  Exosomal proteins of colorectal cancer cells
   7482463
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 7482463
NCBI-ProteinID: XP_002324047
LinkDB
Position
17:complement(8992918..8994927)
AA seq 451 aa
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK
HVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEVTNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAESAEGEDDDGEEYM
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgagagagtgcatctcaatccacattggtcaggctggtattcaagttggtaatgcctgc
tgggaactctactgcctcgaacatggcattcagcctgatgggcagatgccaggtgacaag
actgttgggggaggagacgatgccttcaacacattttttagcgaaactggggctgggaag
cacgttcctcgtgctgtgtttttggacttggaaccaactgtgattgacgaggtcaggact
ggggcttatcgccaactatttcatcctgaacaacttattagtggcaaagaagatgctgcc
aataactttgcaagaggccactacacaattgggaaagagattgtggacttgtgtcttgac
aggattaggaagctagcagataactgtactgggcttcaaggatttttagtttttcatgct
gttggtgggggtactggttctgggcttggatctttgcttttggagaggctttctgttgat
tatggaaagaaatcgaagcttggtttcaccgtttacccttcgccacaagtctccacctct
gtggtcgagccttataacagtgtgttgtccactcattcacttctagaacacactgatgtt
tctgtgttgcttgataatgaggccatctacgatatttgccgcagatctcttgatattgag
agacccacatacactaatctcaacaggcttgtgtctcaggttatctcctcgttgacagca
tcgcttcgatttgatggagcattgaatgtggatgtgacagaattccaaaccaatttggtc
ccataccctcgaatccatttcatgctttcttcatatgccccagttatctctgcagagaag
gcctaccatgagcaactctctgtcgctgaagtgacaaacagtgctttcgagccatcttca
atgatggcaaaatgtgaccctcgccatggtaaatacatggcatgttgcttgatgtataga
ggggatgtggtgccaaaggatgtgaacgcagcagtagcaacaattaagaccaagaggact
attcaatttgttgattggtgcccaactgggtttaaatgtggtattaactaccagcctcct
actgttgttcctggtggtgacttggctaaagttcagagggcagtttgcatgatttcaaac
tcgaccagcgttgctgaggtgttctctaggatcgatcacaagttcgatctcatgtatgcg
aagcgtgcttttgtgcattggtatgttggtgaaggaatggaggaaggagagttttcagaa
gctagggaggatttggctgctctggaaaaggattatgaggaagttggggcagagtccgct
gaaggggaagacgatgatggagaggaatacatgtaa

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