Populus trichocarpa (black cottonwood): 7482463
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Entry
7482463 CDS
T01077
Name
(RefSeq) tubulin alpha chain
KO
K07374
tubulin alpha
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04145
Phagosome
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
7482463
09142 Cell motility
04814 Motor proteins
7482463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7482463
03036 Chromosome and associated proteins [BR:
pop03036
]
7482463
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
7482463
04147 Exosome [BR:
pop04147
]
7482463
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
7482463
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
7482463
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
7482463
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7482463
Exosomal proteins of other body fluids (saliva and urine)
7482463
Exosomal proteins of colorectal cancer cells
7482463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
7482463
NCBI-ProteinID:
XP_002324047
LinkDB
All DBs
Position
17:complement(8992918..8994927)
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK
HVPRAVFLDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEVTNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAESAEGEDDDGEEYM
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtgcatctcaatccacattggtcaggctggtattcaagttggtaatgcctgc
tgggaactctactgcctcgaacatggcattcagcctgatgggcagatgccaggtgacaag
actgttgggggaggagacgatgccttcaacacattttttagcgaaactggggctgggaag
cacgttcctcgtgctgtgtttttggacttggaaccaactgtgattgacgaggtcaggact
ggggcttatcgccaactatttcatcctgaacaacttattagtggcaaagaagatgctgcc
aataactttgcaagaggccactacacaattgggaaagagattgtggacttgtgtcttgac
aggattaggaagctagcagataactgtactgggcttcaaggatttttagtttttcatgct
gttggtgggggtactggttctgggcttggatctttgcttttggagaggctttctgttgat
tatggaaagaaatcgaagcttggtttcaccgtttacccttcgccacaagtctccacctct
gtggtcgagccttataacagtgtgttgtccactcattcacttctagaacacactgatgtt
tctgtgttgcttgataatgaggccatctacgatatttgccgcagatctcttgatattgag
agacccacatacactaatctcaacaggcttgtgtctcaggttatctcctcgttgacagca
tcgcttcgatttgatggagcattgaatgtggatgtgacagaattccaaaccaatttggtc
ccataccctcgaatccatttcatgctttcttcatatgccccagttatctctgcagagaag
gcctaccatgagcaactctctgtcgctgaagtgacaaacagtgctttcgagccatcttca
atgatggcaaaatgtgaccctcgccatggtaaatacatggcatgttgcttgatgtataga
ggggatgtggtgccaaaggatgtgaacgcagcagtagcaacaattaagaccaagaggact
attcaatttgttgattggtgcccaactgggtttaaatgtggtattaactaccagcctcct
actgttgttcctggtggtgacttggctaaagttcagagggcagtttgcatgatttcaaac
tcgaccagcgttgctgaggtgttctctaggatcgatcacaagttcgatctcatgtatgcg
aagcgtgcttttgtgcattggtatgttggtgaaggaatggaggaaggagagttttcagaa
gctagggaggatttggctgctctggaaaaggattatgaggaagttggggcagagtccgct
gaaggggaagacgatgatggagaggaatacatgtaa
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