KEGG   Populus trichocarpa (black cottonwood): 7482478
Entry
7482478           CDS       T01077                                 
Name
(RefSeq) amino acid transporter AVT1I
  KO
K15015  solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04082  Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:pop00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04082 Neuroactive ligand signaling
    7482478
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pop02000]
    7482478
Transporters [BR:pop02000]
 Solute carrier family (SLC)
  SLC32: Vesicular inhibitory amino acid transporter
   7482478
SSDB
Motif
Pfam: Aa_trans Trp_Tyr_perm
Other DBs
NCBI-GeneID: 7482478
NCBI-ProteinID: XP_002323862
UniProt: B9IJY4
LinkDB
Position
17:9651608..9653347
AA seq 430 aa
MENMSRDEPSLTVPLIVEEKQSLGCKLEDVETNYSHSTTGTASSFKTVFHGLNALSGVGI
LSIPYALSSGGWLSLILLFVISFAAFYSGLLIQRCMDVDSNIRTYPDIGERAFGYKGRLL
VSVVIYAELYLVAAGFLILEGDNLQRLFPDMVLGVAGFEIGARQSFVIFVALIILPTVWL
DNLSILSYISASGVLASVIILVSIFWTGAFDGIGFNQKGTLVNWHGIPNAVSLYAFCYCA
HPVFPTLYTSMKNKRQFSNVLIVCFILCTLSYASMAALGYLMFGSNVQSQITLSLPTHNF
SSRLAIYTTLVNPIAKYALMVTPIVKVTKNWFPLNCNNRPFSLFISTAFVISNVMVALSV
PFFGDLMSLVGAFLSMTASTVLPCLCYMKISRTYRRFGFEMVVLVSVVLLGIAVVVFGTY
SSILQIIGHL
NT seq 1293 nt   +upstreamnt  +downstreamnt
atggaaaacatgtctcgtgatgaaccatcgttgactgtgcctctcattgttgaggagaaa
caaagtctaggatgcaaacttgaagatgtggagacaaattacagtcattcaactacgggg
accgcctcttccttcaagactgttttccacggactaaatgctttgtcaggggttgggatc
ctttcgatcccatatgctctatcgtctggaggatggttgagcttgattctcctctttgtt
atctccttcgcagccttttactcgggcttactgatccaaagatgcatggatgtggattca
aatatcaggacctatcctgatataggagagcgtgcttttggatacaagggaagacttctg
gtttcagttgtcatctatgcagaactctacctagttgcagcaggattcctgattcttgaa
ggggataatttacaaagattatttcctgacatggtgcttggagtggcagggtttgaaata
ggtgcaagacaaagctttgttatttttgtggcccttatcattttgcccacggtttggttg
gataacttgagcattctttcttatatctctgccagtggggttttagcttcggttatcatt
ctggtctcaattttctggactggtgcatttgatggaattgggtttaatcaaaagggaaca
ttagtaaattggcatggaatacctaatgcggtaagcttgtatgccttctgttactgtgca
catccagtcttccctaccctgtacacttctatgaaaaacaagcgccagttctctaacgtt
ttgattgtgtgctttattctatgcaccttaagctacgcatcaatggcagctctgggttac
ttgatgttcggatcaaacgttcagtcacagataacattaagccttccaactcataatttc
agctcaagactggcaatatacaccactctggtcaatccaatagccaaatacgcgctgatg
gtgacaccaatagtgaaagttaccaaaaactggtttccattgaactgcaataacaggcca
tttagcctcttcatcagtacggcttttgtgataagcaatgtcatggtagccctctctgtc
cctttcttcggtgatctcatgtcgctggtcggggcattcttaagtatgacagcttctact
gtacttccatgtttatgttacatgaagatttcaagaacttatagaagattcggatttgaa
atggtggtattagtgagcgtagtgctactgggcattgcagttgtagtatttggtacttac
tcctctatcttgcagataatagggcacttgtaa

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