Populus trichocarpa (black cottonwood): 7482478
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Entry
7482478 CDS
T01077
Name
(RefSeq) amino acid transporter AVT1I
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
7482478
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7482478
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
7482478
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Motif
Pfam:
Aa_trans
Trp_Tyr_perm
Motif
Other DBs
NCBI-GeneID:
7482478
NCBI-ProteinID:
XP_002323862
UniProt:
B9IJY4
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Position
17:9651608..9653347
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AA seq
430 aa
AA seq
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MENMSRDEPSLTVPLIVEEKQSLGCKLEDVETNYSHSTTGTASSFKTVFHGLNALSGVGI
LSIPYALSSGGWLSLILLFVISFAAFYSGLLIQRCMDVDSNIRTYPDIGERAFGYKGRLL
VSVVIYAELYLVAAGFLILEGDNLQRLFPDMVLGVAGFEIGARQSFVIFVALIILPTVWL
DNLSILSYISASGVLASVIILVSIFWTGAFDGIGFNQKGTLVNWHGIPNAVSLYAFCYCA
HPVFPTLYTSMKNKRQFSNVLIVCFILCTLSYASMAALGYLMFGSNVQSQITLSLPTHNF
SSRLAIYTTLVNPIAKYALMVTPIVKVTKNWFPLNCNNRPFSLFISTAFVISNVMVALSV
PFFGDLMSLVGAFLSMTASTVLPCLCYMKISRTYRRFGFEMVVLVSVVLLGIAVVVFGTY
SSILQIIGHL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacatgtctcgtgatgaaccatcgttgactgtgcctctcattgttgaggagaaa
caaagtctaggatgcaaacttgaagatgtggagacaaattacagtcattcaactacgggg
accgcctcttccttcaagactgttttccacggactaaatgctttgtcaggggttgggatc
ctttcgatcccatatgctctatcgtctggaggatggttgagcttgattctcctctttgtt
atctccttcgcagccttttactcgggcttactgatccaaagatgcatggatgtggattca
aatatcaggacctatcctgatataggagagcgtgcttttggatacaagggaagacttctg
gtttcagttgtcatctatgcagaactctacctagttgcagcaggattcctgattcttgaa
ggggataatttacaaagattatttcctgacatggtgcttggagtggcagggtttgaaata
ggtgcaagacaaagctttgttatttttgtggcccttatcattttgcccacggtttggttg
gataacttgagcattctttcttatatctctgccagtggggttttagcttcggttatcatt
ctggtctcaattttctggactggtgcatttgatggaattgggtttaatcaaaagggaaca
ttagtaaattggcatggaatacctaatgcggtaagcttgtatgccttctgttactgtgca
catccagtcttccctaccctgtacacttctatgaaaaacaagcgccagttctctaacgtt
ttgattgtgtgctttattctatgcaccttaagctacgcatcaatggcagctctgggttac
ttgatgttcggatcaaacgttcagtcacagataacattaagccttccaactcataatttc
agctcaagactggcaatatacaccactctggtcaatccaatagccaaatacgcgctgatg
gtgacaccaatagtgaaagttaccaaaaactggtttccattgaactgcaataacaggcca
tttagcctcttcatcagtacggcttttgtgataagcaatgtcatggtagccctctctgtc
cctttcttcggtgatctcatgtcgctggtcggggcattcttaagtatgacagcttctact
gtacttccatgtttatgttacatgaagatttcaagaacttatagaagattcggatttgaa
atggtggtattagtgagcgtagtgctactgggcattgcagttgtagtatttggtacttac
tcctctatcttgcagataatagggcacttgtaa
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