Populus trichocarpa (black cottonwood): 7482823
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Entry
7482823 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7482823
03036 Chromosome and associated proteins [BR:
pop03036
]
7482823
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7482823
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7482823
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
7482823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
PHD
zf-RING_6
zf-RING_5
TRAF3_RING
zf-rbx1
Prok-RING_4
RING_XB3-XBAT31
PHD_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
7482823
NCBI-ProteinID:
XP_024458516
LinkDB
All DBs
Position
1:complement(5093057..5097393)
Genome browser
AA seq
588 aa
AA seq
DB search
MELPCDGAGICMACKNKPPNEETLNCKTCATPWHATCLVYPPQELADTLQWECPDCSMIN
PPSTSAVAAGRSEEAGELIASIRKIEDDKSLTEQEKAKKRQKLLSGATAGPSPSDGDEKK
EKNDVLDILDKELTCSFCMQMLDRPVTTPCGHNFCLKCFQRWIGQGKRTCAYCRVQIPPK
MASQPRINSTLVIAIRMARMSRSSNAGGAPKVYHFVQNQNRPDKAYTTERAKRAGKANAC
SGKIFVTVPPDHFGPIPAENDPERNMGVLVGEIWEDRLACRQWGAHLPHVAGIAGQSTHG
SQSVALSGGYLDDEDHGEWFLYTGSGGRDLSGNKRTNKDQSFDQKFDKMNEALRVSCLKG
YPVRVVRSHKEKRSSYAPETGVRYDGVYRIEKCWRKNGIQGFKVCRYLFVRCDNEPAPWT
SDVQGDRPRALPVIKELKNAIDITERKGSPSWDYDEEKSCWMWKKPPPVSKKRVADSGDP
EDSKVMRTIKRQRQNVSVREKLLKEFSCQICRKVMVYPITTPCAHNFCKACLEGAFAGQS
FTRQRGQGRRTLRVQKNVMKCPSCIIDIADFLQNPQFPFENFVNFLGR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggaactaccatgcgacggagcgggcatttgcatggcctgcaaaaacaagccaccaaat
gaagaaaccctcaattgcaaaacatgtgccaccccctggcacgccacgtgtctcgtctat
ccacctcaggagttagcagatacgctccaatgggagtgccctgactgctccatgataaat
ccgccttccacttccgctgtcgccgccggacgatcggaggaggccggagaactcatcgcc
tcgattcggaagatcgaggacgataagtccttgaccgaacaggagaaggcaaagaaacgg
cagaagcttttgagtggagccaccgcaggtccgtcgccatcggacggagatgaaaagaaa
gagaagaacgatgtgcttgatatacttgacaaggagttaacttgctctttctgtatgcaa
atgctggatagacctgttacgacaccatgtggtcataacttttgcctgaagtgcttccag
agatggattggacaaggcaaacgtacttgtgcatattgccgtgtacaaatcccacccaag
atggcaagccaacctcgcatcaattccacacttgttattgccatacgtatggcaaggatg
tcaagatccagcaatgctgggggggctccaaaggtatatcattttgtccagaaccaaaac
aggccggacaaagcatacacaacggagcgtgctaagagagctggcaaggctaatgcttgt
agcgggaagatctttgtcacagttcctcctgatcactttggtccaattcctgctgagaac
gacccagaaagaaatatgggtgttttggtgggagagatatgggaggataggctggcatgt
aggcaatggggtgcccatctcccccatgttgcaggaattgctggtcagtctactcatggt
tcacaatcagtggctctctctggaggttatttagacgacgaggatcatggtgaatggttc
ctttacactgggagtggaggaagggacctgagcggcaataaacgtacaaacaaggatcaa
tcttttgatcaaaagtttgacaagatgaatgaggccttacgagtaagctgcctaaagggc
tatcctgtaagagtcgttaggtctcacaaagagaagcgatcatcttatgccccagaaaca
ggtgtacgatatgatggggtttatagaatcgaaaagtgttggcgtaagaatggaatacag
ggctttaaagtttgtaggtatctttttgtcagatgtgacaatgagcctgccccatggacc
agtgatgttcaaggggaccgtccaagggcccttcctgtcatcaaggagctaaagaatgca
attgatataactgaaaggaaggggtccccatcctgggactatgatgaggaaaaaagttgc
tggatgtggaaaaagcctccgccagtcagtaaaaaaagagttgctgatagtggagatcca
gaagatagcaaagtgatgaggacaattaagcggcaaaggcagaatgtatcggtgagagaa
aaacttttgaaagagtttagttgtcaaatctgtcggaaggtgatggtgtatccaattact
actccatgcgcgcataatttctgcaaagcatgtctagagggtgcctttgctggccaaagt
ttcactaggcagagaggtcagggcagacggacactaagagtgcaaaagaatgttatgaaa
tgtccatcttgtatcattgacatagctgactttcttcagaacccacagtttccttttgag
aactttgtaaattttcttggtaggtga
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