Populus trichocarpa (black cottonwood): 7482861
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Entry
7482861 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase RHA2A
KO
K16282
E3 ubiquitin-protein ligase RHA2 [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7482861
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7482861
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7482861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_Vps41
Prok-RING_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
7482861
NCBI-ProteinID:
XP_002312419
UniProt:
B9HJ71
LinkDB
All DBs
Position
8:complement(8172717..8173870)
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AA seq
168 aa
AA seq
DB search
MGLQNQLNDVSSESIPLLLIAFIANCVACLRSFFFSVFHSVGVHRLDQAHVMDDRLMGSM
GSGLAGLIVLAEQRKLNRVFAYKYCCGRDDGNDKGGSDCVVCLCTLRDGDQVRKLDCRHV
FHKECFDGWLDHLNFNCPLCRWPLVSDERVEETRRRVGENLVEWFSLR
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggggttacaaaaccagctgaacgatgtgtcttctgaatcgatcccgttactccttata
gcattcatagccaactgtgttgcctgccttcgctctttctttttcagcgttttccactcc
gtgggcgttcaccgattggaccaagcccacgttatggatgataggctgatgggctcaatg
ggctctggtcttgccggcctgatcgtgcttgccgagcagcgtaaactcaaccgggtattt
gcttacaagtattgttgcggtcgtgatgatggaaatgacaagggaggatcggattgtgtg
gtgtgcttgtgcacgctaagggatggggaccaggtgaggaagctcgattgccgccacgtg
tttcacaaggaatgttttgatggatggcttgatcatctcaattttaactgccctctttgt
cggtggccgcttgtttccgatgagcgcgttgaagaaacgcgaaggcgcgtgggggagaac
ttagtggagtggttctccctgagatga
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