Populus trichocarpa (black cottonwood): 7482904
Help
Entry
7482904 CDS
T01077
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 3 isoform X1
KO
K19891
glucan endo-1,3-beta-glucosidase 1/2/3 [EC:
3.2.1.39
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00500
Starch and sucrose metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
7482904
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pop00537
]
7482904
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
7482904
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pop00537
]
Enzymes
7482904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
X8
Motif
Other DBs
NCBI-GeneID:
7482904
NCBI-ProteinID:
XP_002312452
LinkDB
All DBs
Position
8:complement(8812158..8817813)
Genome browser
AA seq
498 aa
AA seq
DB search
MAVLFLLFLLTVSVVSADEDGFIGVNIGTAISDMPSPTQVVALLKAQNIRHVRLYDADRA
LLLALANTGIRVTVSVPNDQILGIGQSNATAANWVARNVIAHVPATNITAIAVGSEILTT
LPNAAPVLVSALKFIHSALVASNLDGQIKVSTPHSSSIILDSFPPSQAFFNRSWDPVMVP
LLKFLQSTGSYFMLNAYPYYDYMQSNGVIPLDYALFRPLPPDKEAVDANTLLHYTNVFDA
IVDAAYFAMSYLNFTNVPIFVTESGWPSKGDSSEPDATLENANTYNSNLIRHVLNNTGTP
KHPKIAVSTYIYELYNEDLRPGAISEKNWGLFDANGMPVYTLHLTGAGTVLANDTTNQTF
CVAKEGADPKMLQAALDWACGPGKVDCSYLLQGQPCYEPDNVVAHSTYAFNAYFQKMAKS
PGTCDFKGVATITTTDPSHGSCIFPGSAGRNGSLPNTTSLAPSSNSTTSGCHSVYIYGAG
SFTTSVIIGVLLMSVFFL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctgttcctgcttttcttgctgacagtgtctgttgtttctgctgatgaagat
ggcttcattggtgtaaacattggcacagcaatttctgacatgccaagcccaactcaggtg
gtagcccttcttaaggctcagaatattagacatgtcaggctctatgatgcagaccgagcc
ctgcttcttgcccttgccaacacaggcatccgtgtaactgtttctgttcctaatgaccag
atccttggcattggtcaatcgaatgccacggcagccaactgggttgctcgaaatgtaata
gcccatgtccctgccaccaacatcacagccattgcagttggatctgaaatccttactacg
ctcccaaatgctgcccctgtcctggtctctgccctgaagttcatccattctgcccttgtt
gcctccaatcttgatggccaaattaaagtctctacccctcactcttcttccatcatcctt
gactcgttccctccttctcaagccttttttaatcgctcttgggatccagtcatggttccc
ttgcttaaatttttgcagtccacagggtcgtacttcatgctaaatgcatatccatattac
gactacatgcaatcaaatggtgtgatcccattggattatgcgcttttccgtcccctccct
cctgacaaggaagccgtggatgctaatacactccttcattacactaatgtctttgatgcc
attgttgatgcagcatattttgctatgtcctatctgaatttcaccaatgtccctattttt
gtgacggagtctggttggccctccaaaggtgactcatctgagccagatgcaacacttgaa
aatgctaacacttacaacagcaacttgatcaggcatgtgcttaataacacaggcactccc
aaacatcctaaaattgcagttagtacatatatttatgaactctataatgaagatttgaga
cccggggcaatatctgaaaagaactgggggctttttgatgccaacggcatgccagtttat
accttacacttgactggtgctggtactgtattggcaaacgacaccacaaaccaaaccttc
tgcgtggcaaaggaaggtgctgacccgaagatgctacaagctgctcttgattgggcttgt
ggaccaggaaaagttgattgctcatacttgttacaagggcagccatgttacgagccagat
aatgttgttgctcattcaacatatgctttcaatgcttatttccagaagatggccaagtct
cccggtacttgtgattttaaaggtgtggctaccatcaccaccactgacccaagtcatggt
tcctgtatatttcctggaagtgctggaagaaatggcagcttgccaaatacaacttctctg
gcaccatcttcaaattctacgacgtctggttgccattcagtatatatctatggtgctggc
tctttcacaacctctgtgattataggtgttttactaatgagcgtgtttttcttgtaa
DBGET
integrated database retrieval system
