Populus trichocarpa (black cottonwood): 7483468
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Entry
7483468 CDS
T01077
Name
(RefSeq) anaphase-promoting complex subunit 8 isoform X1
KO
K03355
anaphase-promoting complex subunit 8
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
7483468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7483468
03036 Chromosome and associated proteins [BR:
pop03036
]
7483468
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
7483468
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
7483468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC8
TPR_1
TPR_2
TPR_14
TPR_8
TPR_11
TPR_17
TPR_12
TPR_16
ANAPC3
TPR_19
TPR_CcmH_CycH
TPR_10
TPR_15
TPR_9
TPR_NPHP3
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
7483468
NCBI-ProteinID:
XP_002318627
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Position
12:complement(9844886..9848197)
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AA seq
576 aa
AA seq
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MNSKETCRSELRIALRQLSDRCLYSASKWAGEQLVGIEQDPAKFTPTNTRFQRGSSSIRR
RFRTNDITSTPVTGMSYVSTPVLEEDEVIDGDFYLLAKSYFDCREYKRAAHVLRDQNAKK
SVFLRCYALYLAGEKRKEEEMIELEGPLGKSDAVNRELVSLERELSTLRKNGTIDPFGLY
LYGLVLKNRGNQNLARTVIVESVNSYPWNWNAWTELQSLCTTIEMLNSLNLSNHWMKDFF
LASAYQELRMHNESLAKYEYLQGTFSFSNYIQAQIAKAQYCLREFDQVEVIFEELLRNDP
YRVEDMDMYSNVLYAKECFSALSYLAHRVFMTDKYRPESCCIIGNYYSLKGQHEKSVMYF
RRALKLDKKYLSAWTLMGHEYVEMKNTPAAVDAYRRAVDINPCDYRAWYGLGQAYEMMGM
PFYALHYFKKSVFLQPSDSRLWIAMAQCYETDQLHLLEDAIKCYRRAANCNDKEAIALHQ
LAKLHFELGRPEEAAFYYKKDLDRMEDEEREGPNMVEALLFLAQHCRTHKRLEEAEVYCT
RLLDYTGPEKEMAKNMLRGMRSESSFPSMDVEHFPP
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgaaagagacttgccggagcgagcttcgcattgcccttcgccaactaagcgat
cgctgcctttactctgcttccaaatgggcaggggagcagctggtaggaatcgagcaagac
cctgcaaagttcactcctacaaacaccagattccagcgtggaagttctagcattcgtcga
agattccgaaccaatgacattacctcaacgcctgttactggcatgtcttatgtgtccact
cctgtattggaggaagatgaggtcatagatggtgacttctaccttctggctaagtcctac
tttgactgtcgagagtataaaagggctgctcatgtgcttcgcgatcaaaatgcaaagaaa
tcagttttcttgcgctgttatgctctttatctggctggagaaaagaggaaagaagaagag
atgatagaacttgaggggccccttggtaagagtgatgctgttaaccgtgagctggtttct
ctggagagggagttgtcaactcttcgcaagaatggcacaattgatccctttgggttatac
ttatatggtcttgtgcttaaaaacagaggcaatcaaaatcttgctcggacagtcattgtg
gagtctgtgaatagctacccttggaactggaatgcctggacagagctgcagtctttatgt
accacaattgagatgctgaacagccttaacctaagcaaccactggatgaaggacttcttt
cttgccagtgcttaccaagagctccggatgcacaatgaatcccttgccaaatatgaatat
cttcaaggtacattcagttttagtaattacatacaggctcagattgccaaagctcaatat
tgtttgagagaatttgatcaagtcgaggtaatatttgaagaacttttgagaaatgacccc
tatcgagtggaagacatggatatgtattccaatgtcctctatgcaaaggagtgtttctct
gctcttagttaccttgcccacagggtatttatgactgataaatacaggcctgaatcttgc
tgcatcattggaaattattacagtttaaagggccagcatgagaagtctgttatgtatttt
aggagggcactcaagctggacaaaaaatatttgtctgcttggacacttatgggtcatgag
tatgttgaaatgaaaaacactcctgctgctgttgatgcttatcgacgggctgtggatatc
aatccttgtgattatcgagcttggtatgggttaggacaagcttatgagatgatggggatg
cccttctatgcactacactattttaagaagtcggtgttcttgcagccaagtgattctcga
ttgtggattgccatggcccagtgctatgaaactgatcagcttcatttgcttgaggatgca
atcaagtgttacagaagggctgcaaattgtaatgacaaggaagcgatagccctgcatcag
ttagcaaaactgcactttgagcttgggcgtccagaagaggcagcattttactacaaaaag
gacttggataggatggaagatgaagagagggaaggaccaaacatggttgaagccttgctc
tttcttgcccaacactgcagaactcataagagattagaagaagcagaggtgtattgcacc
cgtcttctggattacactggcccagagaaggaaatggcaaagaatatgcttcgtggaatg
agatcagaatctagttttccttcaatggatgttgagcattttcctccctga
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