KEGG   Populus trichocarpa (black cottonwood): 7483525
Entry
7483525           CDS       T01077                                 
Name
(RefSeq) ras-related protein Rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04144  Endocytosis
pop04145  Phagosome
pop04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    7483525
   04145 Phagosome
    7483525
   04148 Efferocytosis
    7483525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7483525
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7483525
   04031 GTP-binding proteins [BR:pop04031]
    7483525
Membrane trafficking [BR:pop04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    7483525
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   7483525
  Exosomal proteins of other body fluids (saliva and urine)
   7483525
  Exosomal proteins of colorectal cancer cells
   7483525
  Exosomal proteins of bladder cancer cells
   7483525
GTP-binding proteins [BR:pop04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    7483525
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA ATP_bind_1 RsgA_GTPase nSTAND3 Septin AAA_16 AAA_7 cobW AAA_24 ATPase_2 AAA_22 PduV-EutP NTPase_1 SRPRB NACHT TniB MCM AAA_5 ATP-synt_ab
Other DBs
NCBI-GeneID: 7483525
NCBI-ProteinID: XP_002304199
UniProt: A9P8W4
LinkDB
Position
3:7871837..7874354
AA seq 207 aa
MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRMFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF
VVLGNKIDVDGGNSRVVSEKKAKAWCAAKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE
PEEEIYLPDTIDVGGGGRQQTSTGCEC
NT seq 624 nt   +upstreamnt  +downstreamnt
atggcttctcgcagacgcatgctcttgaaggttataattctcggtgacagcggggtaggc
aagacatcgctgatgaatcagtatgtgaatcgaaagttcagtaatcaatacaaggcaaca
ataggagctgactttttaaccaaagaagttcagtttgaggatagaatgttcacattacag
atatgggatactgcaggacaagagaggtttcaaagtcttggagtggctttctatcgtggc
gcggactgctgtgttcttgtgtatgatgtgaatgtcatgaagtcatttgacaatcttaac
aattggagagaggagtttctgattcaggcaagtccatctgaccctgaaaacttcccattt
gttgtgttggggaacaagatagatgttgatggaggcaatagtcgagtggtttctgagaag
aaagcaaaggcatggtgtgctgctaagggaaacataccctactttgagacttctgcaaaa
gaaggtttcaatgtggatgctgcatttcagtgtatagccaaaaatgcgcttaagaatgaa
cctgaagaagaaatataccttcctgacaccatcgatgttgggggtggggggcgacaacaa
acttccaccggttgcgaatgttga

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