Populus trichocarpa (black cottonwood): 7483525
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Entry
7483525 CDS
T01077
Name
(RefSeq) ras-related protein Rab7
KO
K07897
Ras-related protein Rab-7A
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
pop04145
Phagosome
pop04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7483525
04145 Phagosome
7483525
04148 Efferocytosis
7483525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7483525
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7483525
04031 GTP-binding proteins [BR:
pop04031
]
7483525
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
7483525
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7483525
Exosomal proteins of other body fluids (saliva and urine)
7483525
Exosomal proteins of colorectal cancer cells
7483525
Exosomal proteins of bladder cancer cells
7483525
GTP-binding proteins [BR:
pop04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
7483525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
Gtr1_RagA
ATP_bind_1
RsgA_GTPase
nSTAND3
Septin
AAA_16
AAA_7
cobW
AAA_24
ATPase_2
AAA_22
PduV-EutP
NTPase_1
SRPRB
NACHT
TniB
MCM
AAA_5
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
7483525
NCBI-ProteinID:
XP_002304199
UniProt:
A9P8W4
LinkDB
All DBs
Position
3:7871837..7874354
Genome browser
AA seq
207 aa
AA seq
DB search
MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRMFTLQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF
VVLGNKIDVDGGNSRVVSEKKAKAWCAAKGNIPYFETSAKEGFNVDAAFQCIAKNALKNE
PEEEIYLPDTIDVGGGGRQQTSTGCEC
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcgcagacgcatgctcttgaaggttataattctcggtgacagcggggtaggc
aagacatcgctgatgaatcagtatgtgaatcgaaagttcagtaatcaatacaaggcaaca
ataggagctgactttttaaccaaagaagttcagtttgaggatagaatgttcacattacag
atatgggatactgcaggacaagagaggtttcaaagtcttggagtggctttctatcgtggc
gcggactgctgtgttcttgtgtatgatgtgaatgtcatgaagtcatttgacaatcttaac
aattggagagaggagtttctgattcaggcaagtccatctgaccctgaaaacttcccattt
gttgtgttggggaacaagatagatgttgatggaggcaatagtcgagtggtttctgagaag
aaagcaaaggcatggtgtgctgctaagggaaacataccctactttgagacttctgcaaaa
gaaggtttcaatgtggatgctgcatttcagtgtatagccaaaaatgcgcttaagaatgaa
cctgaagaagaaatataccttcctgacaccatcgatgttgggggtggggggcgacaacaa
acttccaccggttgcgaatgttga
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