Populus trichocarpa (black cottonwood): 7483538
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Entry
7483538 CDS
T01077
Name
(RefSeq) peroxisome biogenesis protein 2
KO
K06664
peroxin-2 [EC:
2.3.2.27
2.3.2.36
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
7483538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7483538
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7483538
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
7483538
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
7483538
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
7483538
NCBI-ProteinID:
XP_002304212
UniProt:
B9GXC6
LinkDB
All DBs
Position
3:7551821..7557817
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AA seq
340 aa
AA seq
DB search
MAALNLRQPPPEDEWVHTYLKLLPQWKPLALSHQSMIPISISRVNQFDAARLDIEMSAML
KEQLVKVFSLMKPGMLFQYEPELDAFLEFLIWRFSIWVDKPTPGNALMDLRYRDERAMES
RGKVRTGLEGPGLTIAQKIWYCIATVGGQYTWARLQSFSAFRRWGDSEQRPLARRAWILI
QRVEGLYKAASFGNLLIFLYTGRFRNLIERVLQARLVYGSPNMNRAVSFEYMNRQLVWNE
FSEMLLLLLPLLNSSSVKKFLGPFSKDKSSSSKVDDDTCPICQAIPTIPFLSLPCQHRYC
YYCLRTRCAAAPSFRCPRCGEPVVAMQRHGGLAGNTNPNQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcttaatcttcgacaaccgccaccagaggatgaatgggttcacacttatcta
aaattgcttcctcaatggaaacctcttgctctttctcaccagtcaatgataccgatttca
atatctagagttaatcaatttgatgctgcgagattggacattgaaatgtcagctatgtta
aaggaacaattggttaaggtcttttctctaatgaagccagggatgttatttcaatatgag
ccggaacttgatgctttccttgagtttctcatttggaggttctctatctgggtagataag
cctactccaggaaatgctctcatggacctgaggtacagagatgaacgtgcaatggaatca
agaggaaaagttagaacaggtttggaaggacctggactgaccattgcacagaaaatttgg
tattgcattgccactgttggtggtcagtacacctgggctcgcttacagtcattctctgct
tttcgtagatggggtgattctgaacagaggccactggcaaggcgtgcgtggattttgata
caacgtgttgagggactttataaagctgcttcatttggcaacctactaatatttctttac
acaggacggtttagaaacctcattgaaagagtcttgcaagcaaggcttgtctacggaagc
cctaatatgaaccgagcagttagctttgagtacatgaatcgccagttagtgtggaatgaa
ttttcggagatgttgctgctacttctacctcttcttaactcctcgtctgttaaaaaattt
cttggcccattttcaaaggataaatcttcaagctccaaagtagatgatgatacttgtcca
atttgccaggcaattccaaccattccatttctttctcttccctgtcagcacaggtactgc
tactactgccttagaacacgatgtgctgcagctccatcattccgctgtcccagatgtggc
gagccagtggttgctatgcagcgccatggcggtttagctggtaatacaaatccgaaccaa
tga
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