KEGG   Populus trichocarpa (black cottonwood): 7483646
Entry
7483646           CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC7483646
  KO
K22685  DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pop01002]
    7483646
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pop03400]
    7483646
Peptidases and inhibitors [BR:pop01002]
 Metallo peptidases
  Family M80
   7483646
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     7483646
SSDB
Motif
Pfam: WLM Zn_ribbon_RanBP YgjP-like SVIP FRG2
Other DBs
NCBI-GeneID: 7483646
NCBI-ProteinID: XP_024467631
LinkDB
Position
11:complement(11979063..11988323)
AA seq 439 aa
MNLSDLNKVWEIKALKKPGEEEARRMLDKIAKQVQPIMRKHNWRVKLLSEFCPNNRSLLG
LNVGGGVHVKLRLRRPNRDLDFFPFHQVLDTMLHELCHNVHGPHNANFYKLWDELRKECE
ELIFKGITGTGEGFDLPGRRLGGFSCQPALSSLRKTALAAAEKRAKLGSMLPSQPKRLGG
DSTIMAALSPIQAAAMAAERRLQDEIWCGSLLAETDETSGDGETSSDIAENPVSMGEFTE
SSRLHNCRKRGCESNDRTACLSSNGHSVSDSNFVDLSKDASTSGSMLDHGTNLRKKICNS
YKDPFPDTTTHIEGSFIDLTSDSIFGSTTNLDTRHVLEAPPLTSDSSFGSICNCDTAHTP
EASSLWECGTCTLLNPQLAPICELCGAQKPKDASTKNKIWSCKFCTLENCLKLDRCLACG
QWRYSNGPPVSTRAPNLGT
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgaatttgagtgatttaaacaaagtatgggaaatcaaagccctaaaaaaaccaggagaa
gaggaagccagaaggatgttagacaaaatagccaaacaggtgcagcccatcatgcgtaaa
cacaattggcgtgtcaagcttctctctgaattctgtccaaacaaccggtctcttctggga
ttaaatgtaggaggtggggtgcatgtgaagttgaggcttcggagaccaaacagggatttg
gatttctttccattccatcaggttcttgatacaatgcttcatgagctttgccataatgtt
catggtccccacaacgccaacttttacaagctctgggatgaactcagaaaggagtgcgaa
gagttgattttcaagggaatcactggcacaggagagggttttgatcttccagggaggcgt
ttgggtgggttttcctgccaacctgctctgtcatctcttcgcaaaactgccctagctgct
gcggaaaagagggcgaaattaggatccatgctgccatctcagcctaaaaggcttggaggt
gatagtaccatcatggctgcactcagtccaatacaagctgctgcaatggctgcggaaagg
aggttgcaggatgagatatggtgtggttctctgttggctgagactgatgagacctctggt
gatggagaaactagctctgatattgcagaaaaccctgtatctatgggggaatttacagaa
agctcaaggttacataactgtagaaaaagaggttgtgaatcaaatgacagaacagcttgt
ttatcttccaatggacattcagtttcagattctaattttgtggatttatccaaagatgct
tcaacatctgggtctatgctcgatcatggcaccaaccttagaaaaaaaatttgcaattca
tataaggatccatttcctgatactactacccacatagaaggtagtttcattgatttaacg
agtgattcaatttttggatccacaactaatctcgatacaagacatgttctagaggcacct
cctttaaccagtgattcatcctttggttccatatgtaattgtgatacagcacatactcca
gaggcatcttctttgtgggagtgtggaacctgcacactactgaatccacaactagcccca
atatgcgagctttgtggcgcacaaaagcccaaagatgccagcaccaagaacaaaatctgg
tcctgcaaattctgtactttggagaactgtctgaagttggacagatgcttagcatgtggt
caatggagatattcaaatggtccaccagtgtcaactcgtgctcccaaccttggcacctga

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