Populus trichocarpa (black cottonwood): 7483818
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Entry
7483818 CDS
T01077
Name
(RefSeq) T-complex protein 1 subunit alpha
KO
K09493
T-complex protein 1 subunit alpha
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
7483818
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pop03037
]
7483818
04147 Exosome [BR:
pop04147
]
7483818
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP60 / Chaperonin
7483818
Cilium and associated proteins [BR:
pop03037
]
Primary cilia and associated proteins
BBS-CCT complex
7483818
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7483818
Exosomal proteins of colorectal cancer cells
7483818
Exosomal proteins of bladder cancer cells
7483818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-GeneID:
7483818
NCBI-ProteinID:
XP_002301257
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All DBs
Position
2:10710933..10716607
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AA seq
546 aa
AA seq
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MAIAAQTPDILGDRQSGQDVRTQNVVACQAVANIVKSSLGPVGLDKMLVDDIGDVTITND
GATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVASELLKRANDLVRNGIHPTSI
ISGYRLAMREACKYVEEKLAVKVEKLGKVSLVNCAKTSMSSKLIGSDSDFFANMVVDAVQ
AVKMTNVRGEVRYPIKVINILKAHGKSAKDSYLLNGYALNTGRAAQGMPMKVAAARIACL
DFNLQKTKMQLGVQVLVTDPRELEKIRQREADMTKERIGKLLKAGANVVLTTKGIDDMAL
KYFVEAGAIAVRRVRKEDMRHVAKATGATLVSTFADMEGEETFESSLLGYADEVAEERIA
DDDVIMIKGTKTTSAVSLILRGANDYMLDEMERALHDALSIVKRTLESNMVVAGGGAVES
ALSVYLECLATTLGSREQLAIAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTK
ADKKQFSSMGLDLSKGTVRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDEMIKLVKDE
SQNDEQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgccgcacagacacctgatattctcggcgacagacagtccggccaggacgtt
cgcactcaaaatgtggtggcctgtcaagcagtcgccaatatcgttaaatcctcactcggt
cctgttggtctcgacaagatgcttgtagatgatatcggagacgtaacaattaccaatgat
ggtgctactattcttaagatgttagaagtcgagcaccctgctgctaaggttctagtggag
ttggctgagctgcaagaccgagaagttggagacgggacaacttcggttgttattgtagct
tcagagttgctcaagagagcaaatgatctagtgaggaatgggattcacccaacttcaata
atcagtggatatagacttgctatgagggaagcatgcaaatatgttgaagaaaaattggct
gtgaaggttgaaaagctcggaaaagtctctctagtaaactgtgccaagacaagtatgtct
tcaaagttgataggaagtgacagtgacttttttgcaaatatggttgttgacgctgtacaa
gcagtgaagatgaccaatgtaagaggggaagtcagataccccatcaaggtgatcaatatt
ttgaaagctcatggaaagagcgcaaaagatagctaccttttgaatggctatgcactaaat
actggccgtgctgctcaaggaatgcctatgaaagttgcagctgcaaggattgcatgcctt
gacttcaatcttcagaagacaaagatgcagttgggtgtacaagtcttagtcactgatccc
agggagctcgagaaaattcgtcaaagagaagctgatatgacaaaggagcgcattgggaaa
ctcttgaaagctggagccaatgttgttttaacaacaaaaggaattgatgacatggctctt
aagtactttgtcgaggcgggggctattgctgtgagacgtgttcggaaggaggatatgcgt
catgttgccaaggcgactggtgcaaccttggtttcaacatttgctgatatggaaggggag
gaaacatttgagtcatcgcttctggggtatgctgatgaagttgcagaggagcgaattgct
gatgatgatgtaattatgattaagggtacaaaaactacaagcgcggtctccttgattctc
cggggtgcaaatgattatatgcttgatgagatggagagggcgttgcatgatgccttatct
attgttaagaggacccttgaatctaatatggtagtagcaggaggaggggcagttgagtct
gcactatctgtgtatttggagtgccttgctacaactctgggatcacgggaacagttggca
attgcagagtttgctgaatctttattaattataccaaaggtgcttgctgtcaatgctgcc
aaggacgccaccgagttagttgcaaaactacgggcttaccaccacacagcacagacaaag
gccgataagaagcagttttccagtatgggactagatctttcaaaggggactgtacgcaac
aacttagaagctggagtcatcgagccagccatgagcaaagtgaagataattcagtttgcc
actgaagcagccataactatccttcgaattgatgaaatgatcaagcttgtcaaagatgag
agtcagaatgatgagcaatag
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