Populus trichocarpa (black cottonwood): 7483938
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Entry
7483938 CDS
T01077
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25-like
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7483938
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
7483938
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med25_VWA
Motif
Other DBs
NCBI-GeneID:
7483938
NCBI-ProteinID:
XP_002311445
LinkDB
All DBs
Position
8:7538980..7549712
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AA seq
896 aa
AA seq
DB search
MADKQLIVAVEGTAAMGPFWLIIVSDYLEKIIRCYCGNETSGQKPPTSSAELSLVTFNSH
GSYSACLVQRSGWTRDVDIFLHWLSAIPFAGGGFNDAAIAEGLSEALMMFPITPNGNQTQ
PNTDGQRNCILIAASNPHPLPTPVYRPQIQNLEQTENIDAQNESRLSDAETVAKSFPQCS
VSLSVICPKQLPKLRLIYNAGKRNSRAADPPVDNIKNPHFLVLISENFMEARAALSRPGA
TSLPSNQTPVKVDIASVTSVTGPLPASIPSVNGSITNRPPISVGNLPTATVKVEPSTITS
MANGSAFPHITSVPRPSSQGVPSMQTSSPSTTTQDMATNGENAQDLKPNVSVTTQSARSA
PPAAANVNILNNLSQARQVMNSAALSGGTSIGLPSINQTSVAMHMSSMISSGMTSSVPAA
QTVFSSGQPGVSSITGSGNLTGTTQITPNSGLGSFTSATSNMPGNSNLGGISQPMGNLHA
GVSISQSAMSGLGTNPNTMSGSGAQMVQSGMGANPNTMSGLGASGVSSGSNTMIPTPGMS
QQVQSGMQPLGANNNSAANLPLSQQTAGGLQPAQSKYVKVWEGNLSGQRQGQPVFITRLE
GYRSASASETLAANWPPTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKK
LCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQISSQQQQMQQQHHQQMQQQQHP
QLQQLQHQQQLPQLQQQQQLSQLQQQQQQLSQLQQQQPQQLSQLQQQQPQQLPQLQQQQQ
LSQLQQQQLPQMQQQLPQMQQQQQLQQQQQMQQQQQMQQQQQLQQQQQQQLQQQQQQQMQ
QQQQQQLQQMQQQQQMVGTGMGQTYVQGPGRSQLVSQGQVSSQGPANMSGGGFMSQ
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaacagctgatcgtggccgttgaaggcacggccgccatgggccctttctgg
ttgatcatcgtttctgattatcttgaaaagattatcaggtgttattgtggtaatgaaacg
tcagggcagaagccccctacttctagtgctgagctctctcttgtcacgtttaattctcat
ggatcatattctgcttgcctggtacaacgtagtggctggacaagagatgttgacatcttc
ttacactggctatcagccattccttttgctggtggcggtttcaatgatgctgcaattgca
gaagggctttctgaagctctaatgatgttccctattactccaaatggaaaccaaactcaa
ccaaatacagatgggcaaagaaattgtattcttattgctgcaagtaaccctcacccattg
cccactccagtctatcgtccacaaatacaaaatttggagcagactgaaaacatcgatgca
cagaatgaaagtcgtctatctgatgcagagacagttgctaaatcatttcctcagtgctcg
gtttctctttcagtcatctgtccaaaacagcttccaaaacttagattaatctacaatgca
gggaagcgcaacagccgagcagcagatccacctgtcgacaacataaaaaatcctcatttt
cttgtgctgatctcagagaactttatggaggctcgtgctgcattaagtcgtcctggagct
acaagtttgccttctaatcaaacacctgttaaagtggatattgcttcagttacttcagta
actgggccacttccagcttcaattccttcagtgaatggatctatcacaaatcggccgcca
atttcagttggaaatcttccaactgcaactgtgaaagtcgaaccaagtactataacttct
atggcaaatggatctgcttttccccatattacttctgttccacgcccttcatctcaagga
gttccaagcatgcagacttcatcaccatccacgactactcaagatatggcaacaaacggt
gaaaatgcgcaggacttgaaacctaatgtcagtgtgacgacacagtctgcacgttctgcg
cctcctgctgcagctaacgtgaacattctgaacaatctttctcaagcaaggcaagtgatg
aactctgcagccctaagtggaggaacttctattggtctcccatcaataaatcaaacttct
gtggctatgcatatgtcaagtatgatttcaagtggaatgacgtcttccgtgcctgctgct
caaactgtattttcatctgggcaaccaggtgtttcttcaataacagggtcagggaatctt
actgggacaacacaaatcacaccaaactctggtctgggctcattcacttccgcaacttct
aacatgcctggaaactcaaaccttggggggatttcacaaccaatgggtaatcttcacgca
ggtgttagcatcagccaatcagcaatgagtggtctgggtacaaacccaaacacaatgagc
ggttcaggagcacaaatggtacaaagtggaatgggtgcaaaccccaacacaatgagtggt
ctgggtgcttcaggtgtctcttctggttcgaacacaatgattcctactccaggaatgtct
caacaagtacaatctgggatgcagcctcttggtgcaaacaataactcagcagctaatttg
ccattgtcacaacagacagcagggggcttgcaaccagctcaatcgaaatatgtcaaagtt
tgggagggaaacttgtctgggcaacggcaagggcagcctgtctttatcactagactagaa
ggttataggagtgcttcggcctctgagacgcttgcagcaaactggccgccaacaatgcaa
atagttcggcttatatctcaggatcacatgaataacaagcaatatgttggaaaggctgat
tttctagtatttcgggctatgaatcagcatggatttcttggacaactccaagagaagaag
ctttgtgcagtaatccagttaccatctcagacattgctactctctgtttctgacaaagcc
tgccgcttgatagggatgctttttcctggggatatggttgtgtttaagccacaaatatcc
agtcagcagcaacaaatgcaacagcagcatcaccaacagatgcaacaacaacaacatcca
caactacagcagcttcaacatcagcagcagctcccacaactacagcagcagcaacagctc
tcacagctacagcagcagcagcagcagctctcacagcttcaacagcagcagccacagcag
ctctcacagcttcaacagcagcagccacagcagctacctcaattgcagcagcagcagcag
ctctcacagcttcaacagcagcagcttccacaaatgcagcagcagcttccacaaatgcag
cagcagcagcaattgcagcagcagcagcaaatgcagcagcagcagcaaatgcagcagcag
cagcaattgcagcagcagcagcagcagcaattgcagcagcagcagcagcagcaaatgcag
cagcagcagcagcagcagcttcagcaaatgcagcagcagcagcaaatggttggaacagga
atgggtcaaacttatgttcaaggtccaggtcgttcacaattagtttctcaaggacaagtt
tcttcacaagggccagcaaacatgtctggaggaggctttatgagtcaataa
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