Populus trichocarpa (black cottonwood): 7484062
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Entry
7484062 CDS
T01077
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
7484062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7484062
04147 Exosome [BR:
pop04147
]
7484062
04090 CD molecules [BR:
pop04090
]
7484062
Enzymes [BR:
pop01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
7484062
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
7484062
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
7484062
CD molecules [BR:
pop04090
]
Proteins
7484062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_16
RsgA_GTPase
AAA_30
AAA_29
Zeta_toxin
ABC_ATPase
AAA_15
MMR_HSR1
DUF5906
PRK
DUF87
NB-ARC
MeaB
nSTAND1
G-alpha
FAT
Motif
Other DBs
NCBI-GeneID:
7484062
NCBI-ProteinID:
XP_052304878
LinkDB
All DBs
Position
18:14635801..14640082
Genome browser
AA seq
1079 aa
AA seq
DB search
MFITGQLAALYLSWRLAMVAIPALLMLIIPGLVYGKLLGEVGKMIQEAYEVAGGMVEQAV
SSIRTVYSYGGEERTAKDYKIALQPTLKLGIKQGLLKGMAIGTIGITFAVWALQGWYGST
LIINKGAKGGNVFVAGVCVIYGGLALGASLINVKYFIEANMAASQIFKMIYRVPENDPAD
ERGKTMSDVKGEVEFRDIDFEYPSRPGSLVLIKFNLKVMAGQTVGLVGKSGSGKSTVINL
LERFYEPLRGDILLDGIDIKNLQLKWLRSQIGLVNQEPVLFATSIKENILFGKEEASMEE
VIGAAKAANAHNFIHKLPEGYNTLVGQLGAHMSEGQKQRISIARALLRDPRILLLDEATS
ALDSHSEKAVQNSLNQASAGRSTIVISHRLSTLRNADVIAVIQSGQVVEFGSHDQLMENR
SGAYAVMVQLQRTYMDDSVISEDTQEYGSSVALDNGMIGAEETVDISLSRSFSRSMKTNQ
QKEDNYSPPSLWQLISMAAPEWKSSLIGCIAALGYGLIQPLHSFCMAALLSVYFTNDHSE
IRSQTRIYCFAFLAFAVFTILTNVIQHYYFGITGESLTKRLREEIFHKILTFEIEWFDQE
NNSTGAVCSRLATDAAMVRNLVVDRLSFLTQATSAATLAVVLGLVLSWRLALVAIALQPC
IIAAFYLRVMTMRTMSKKILKAQNRSSNLASEAVGNHRTISAFCSQEKVLKLYELTQVSS
KKESHKQSWYAGLGLFISQFLTSALTALIFWYGGRLLFNQKITAKQLFQTFFILVSTGRI
IAEGASMTADLSKGTSALKSVFKILQRNTKMEPENSYAIKPEKINGDIEFKQVYFSYLAR
PEQIILRGLSLKIEAQKVVGLVGRSGSGKSTIIRLIERFYDTASGSVEIDGVDIKCYNLR
ALRSNIALVSQEPTLFSGKIRDNIAYAKENATEAEIIEAATTANAHDFISSLKDGYETHC
GERGVQLSGGQKQRIALARALLKNPAILLLDEATSALDVNSEKLVQEALERTMFGRTCLV
VAHRLSTIQKADKVVVIDKGRVVEEGNHSSLLSEGAKGAYYSLVKLQQLSELPTFEEQP
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcacgggccaactagctgctttatacctcagctggagactagctatggttgca
atcccggcattgttaatgttaatcattccaggattagtatatgggaagctcctaggtgag
gttggaaaaatgatacaagaagcttatgaagttgcaggtgggatggtagagcaagcggtg
tcatcaatcaggactgtttattcctatggtggagaggagaggacagctaaggactataag
attgcattacaaccaactcttaagcttgggatcaaacaaggactgctgaaaggtatggcc
attggtactattggcattacatttgcagtgtgggcacttcagggctggtatggaagtacc
ctgatcataaataaaggagccaaaggtggaaatgtttttgttgccggagtatgcgttata
tatggaggacttgctctaggggcttctctaatcaatgtgaagtacttcatagaggcaaac
atggctgcttctcagatatttaagatgatctatcgagtcccagagaatgatcccgcagat
gaacgggggaaaaccatgtcagatgttaaaggtgaagtggaatttcgagacatagacttc
gagtatccttcaagaccagggagcttggtactgatcaagtttaatcttaaagtcatggct
ggtcagactgttggtttggtaggcaaaagtgggtcaggcaaatcaacagtcataaatttg
ctggagaggttttatgaaccacttaggggagatattctcctagatggtattgacataaag
aaccttcagctgaaatggctgcgaagtcaaatcgggcttgtaaaccaggagcctgtactt
tttgcaacctcaatcaaagaaaacattcttttcggaaaagaggaggcttccatggaagag
gtcatcggagcagccaaagctgctaatgcgcacaacttcatccataaactacctgaagga
tataacactctggtggggcaattgggagctcatatgtctgaagggcagaaacaaaggatt
tccattgcaagagcattattaagggacccaagaattcttcttcttgatgaagcaacgagt
gcactggattcgcattctgaaaaggctgtccagaattctttaaaccaggcctccgcaggg
cgatctactattgtcatttcacaccgcctgtctactctccgaaacgctgatgtaattgct
gtaattcaatctggacaggtggtcgagtttggctctcatgaccaacttatggaaaaccga
agtggtgcttatgcagtaatggtgcagctacagagaacatacatggacgacagtgttata
tcagaagatactcaggagtatggcagctctgttgctttagacaatggaatgattggggca
gaggaaacagtggacatatcactgtctcgaagtttcagtcgcagtatgaaaacaaatcag
cagaaagaagacaattacagccccccatctttatggcaacttataagcatggcagcaccg
gaatggaagtcatctctaataggttgcattgcagctctaggctacggattaattcaacca
ctgcactcattctgtatggcagcacttttatcagtatactttacaaatgatcatagcgag
ataaggtctcaaacaagaatctattgctttgcgtttttagcctttgcagtgtttactatc
ctgacaaatgtgattcagcattactattttgggataacgggagagagcttgacgaaaaga
cttagggaggaaatttttcataaaatcttaacgtttgagattgagtggttcgatcaagaa
aacaacagcaccggtgctgtatgttcgagattggccacagatgcagccatggtgagaaat
cttgttgttgatcgcttgtcatttctgactcaggcgacatcagcagcaactttggctgtt
gttttaggtttagtgttgtcgtggcggcttgcactagtagctattgctctacagccctgt
atcattgcggccttctatctaagagtgatgacaatgcgaacgatgtctaagaaaatactt
aaagcacagaacaggagcagtaacttagctagtgaggcagttgggaaccacagaactatt
tcagcattctgctcccaagagaaggtcttgaaactatatgagcttacgcaggtaagctcc
aagaaagaaagccataagcaatcttggtacgcaggacttggattgttcatctcccagttc
cttacaagtgctctcacagctctgattttctggtatggtgggaggctgttattcaatcaa
aagatcacagccaagcaactctttcaaacatttttcattctggtatcaacaggcagaatt
atagctgagggtgcaagtatgacagcagacctatcaaaaggcaccagcgcgttgaagtcg
gtttttaagattctgcaaagaaatactaaaatggaaccagaaaactcatatgctatcaag
ccagaaaaaattaatggagacatagagttcaaacaggtgtatttctcctacctggcaaga
ccagaacagatcatcttgaggggtttaagcctaaaaattgaagctcaaaaggttgttgga
ctggttggaagaagtggatctggaaaatccaccatcatcagattaattgagagattttat
gacacagcgagtggttcagttgaaattgatggagttgacatcaaatgctataacttgagg
gctttgaggtcaaatatagcattagtaagtcaggaaccaactcttttctcaggaaaaatc
cgagacaacattgcatatgcaaaagagaacgcaactgaagctgagataattgaagcagca
accactgcaaatgctcatgattttataagctccttgaaggatggatacgagacccactgc
ggagaaagaggtgtgcaactatcaggagggcaaaagcaaaggatagcactcgctcgagcc
ttgttgaaaaatcctgcaatattgcttttggatgaggcaacaagtgcactggacgtcaat
tcagagaaacttgttcaagaggcactggagaggaccatgtttggtaggacatgtctagtt
gttgctcatcgactatctaccattcagaaggcagataaagtagtagtgattgacaaaggg
agggtcgtcgaagaggggaatcacagcagcctgctttccgaaggagcaaagggtgcatat
tactcactcgtaaaactccaacaactttcggagctaccaacgtttgaagaacagccttaa
DBGET
integrated database retrieval system
