Populus trichocarpa (black cottonwood): 7484095
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Entry
7484095 CDS
T01077
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00270
Cysteine and methionine metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
7484095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7484095
03032 DNA replication proteins [BR:
pop03032
]
7484095
03036 Chromosome and associated proteins [BR:
pop03036
]
7484095
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pop02048
]
7484095
Enzymes [BR:
pop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
7484095
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
7484095
DNA replication proteins [BR:
pop03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
7484095
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
7484095
Prokaryotic defense system [BR:
pop02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
7484095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
Motif
Other DBs
NCBI-GeneID:
7484095
NCBI-ProteinID:
XP_024448089
LinkDB
All DBs
Position
Unknown
AA seq
1575 aa
AA seq
DB search
MGSSSILDTTTNDPVDNTISSSSSVGMRKNKKGKQKSSVSNVKKEVPEKNTKGKKRNSPD
TNKEEPTGGDGSLKRPKRAAACKDFKEKSVRLHEEKSYVVESKKEQVVDEEILAVRLTQG
QEEGRPNRRLIDFVVHDANGNPQPLEMVEVDDMFISGIIMPHEESIDKEKEVHVRCDGFG
RIEAWDISGYEDGSPVIWLSTEVADYDCIKPAGGYKKFFDHFFQKALACVEVYKKLSRFS
GGNPEFTLDELLAGVVRAMSGNKCFSGAVSIKNFLISQGEFIYHQIIGLDETSTKNDKKF
ADLPVLVALRDESRNHGNVLIAKAANSGGNLVIGPESVDGAVVNQSNQSSTTVEEDEDAK
LARLLQEEEYWQSNMRQKKSRGSVSASNTIYIKINEDEIANDYPLPVFYKHSNEETDEYI
AVASDDVIDHPDDLPRRMLHNWSLYNSDSRLISLELLPMKPCEDIDVTIFGSGSMTEDDG
SGFCLDDGPDQSSSRGLEAQDDMGLPIFLSAIKEWMIEFGSSMIFISLRTDMAWYRLGKP
SKQYASWYKPVLKTVKLARSIITLLKEQSRVSRLSFADVIRKVSEFKKDHHAYISSDLAA
VERYVVVHGQIILQLFAEFPDQKIKKCAFVVGLTRMMEERHHTKWVVNKKAIVQKCHSNL
NPRAAMDTVASGTSKRKLMQATTTRLINRIWGEYYSNYSPEDLKEGNDCDVKEEDELEEQ
DENEDDDKEVVVEKTLKPYSVFEHCKSHTSQKEVRWDGNPVRKTSSGEDIYKQAIVCGQV
IVVGAAVLVEVDEPDELPAIYFVEYMFETRNGSKMFHGRMMKWGSETVLGNTANDREVFL
TNECMNYKLQDVKQAIILEVRKRPWGHHHRKDNANADRIDREKAEERKKKGLPLEYYCKS
LYWPERGAFFTLPFDTMGLGSGVCHSCNLKISEEDKNISKVNSSQTGFSYKGTEYSVHDF
VYVNPHQFAVESGETETFKGGRNVGLKPYAVCQLLEVVPMETKQSETRSTEVKVQRFFRP
DDISPEKAYCSDIREIYYSEETHLLSVEVIEGKCEVRKKIDIPTCSAPAIFDHTFFCEHM
YDPSNGSLKQLPAHIKSKFSAVSKDGDVASRKRKGKSKEGENDTEDDKQLEASPEYRLAT
LDIFAGCGGLSEGLQQAGVSTTKWAIEYEEPAGEAFKLNHAESLMFINNCNVILRAVMER
CGDADDCISTSEAAKLASSLDAKVINGLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKV
QCEMILAFLSFADYFRPKYFLLENVRNFVSFNKGQTFRLTIASLLQMGYQVRFGILEAGA
YGVSQSRKRAFIWAASPEEILPEWPEPMHVFAAPELKITLSEKSQYAAVRSTAYGAPFRA
ITVRDTIGDLPDVANGASKTNLEYGNDPISWFQKKIRGDMVVLTDHISKEMNELNLIRCK
NIPKRPGADWRDLPDEKVKLSTGQMVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSI
TDPQPMGKVGMCFHPEQDRILTVRECARSQGFPDNYQFFGNIQHKHRQIGNAVPPPLAYA
LGRKLKEALDSKRQK
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttcatcaatattggatacaacaacaaatgacccagttgataatactatttct
tcttcatcatctgtaggtatgaggaagaacaaaaaagggaaacaaaaatcttcagtgtct
aatgtaaagaaagaagtgccagaaaaaaacacaaaagggaagaagagaaattcccctgat
accaacaaggaagagcctactggtggcgatggttcactgaaaaggcctaagagagctgct
gcatgcaaagatttcaaggagaaatctgtacgattgcatgaagagaagtcttatgttgtt
gaatcaaagaaagaacaagttgtcgatgaagaaattctagctgttcgtttgactcaaggg
caagaagagggtcgcccaaacaggagattgattgattttgttgtgcatgatgcaaatggc
aacccacagcccttggagatggttgaagttgatgatatgtttatctctggcattataatg
cctcatgaggaaagcattgacaaggaaaaagaagtgcatgttaggtgtgatggctttgga
aggatagaagcatgggatatctctggttatgaagatggatccccagtcatttggctaagt
actgaagtggcagattatgactgcattaagcctgctggtggctacaagaagttctttgat
catttcttccagaaggcacttgcttgtgttgaagtctacaaaaaactctcaagattctct
ggaggaaaccctgaattcacccttgatgagttgcttgctggggttgtgcgagcaatgagt
ggaaataagtgtttctctggtgcagtatccatcaagaatttcctcatttctcagggtgaa
tttatttatcaccaaataattggtttggatgagacttccacaaagaatgataagaaattt
gcagacttgcctgttcttgtagccttgagagatgaaagtcgcaatcatggaaatgttctg
atagcaaaagcagcaaattctggtgggaacttggtgattggtccagaatctgtggatggt
gctgttgtgaatcagtctaaccaatccagtaccacagttgaggaagacgaggatgcaaag
ttagcaagattattgcaggaagaagagtattggcagtctaatatgaggcagaagaaaagt
cgtggttcagtttctgcatccaacacaatctacatcaaaattaatgaagatgagattgca
aatgactaccctctccctgtgttttacaaacactctaatgaagaaaccgatgagtatata
gctgttgcaagtgatgatgtaattgaccaccctgatgatctccctagaagaatgcttcat
aactggtcactttataactcagactcaaggttgatttctttggagcttcttccaatgaaa
ccttgtgaagacattgatgtcaccatctttggatcaggaagtatgactgaagatgacgga
agcggattctgtcttgatgatggtcctgatcagtcttcttcaaggggtttggaggctcag
gatgacatgggtttgccgatatttttgagtgcgataaaggagtggatgattgagtttgga
tcatcaatgatttttatatcactacgcacggacatggcctggtatagacttggaaagcca
tcaaaacaatatgcttcctggtataagccagtcctaaaaacagttaagcttgcaagaagc
atcattacattgttgaaggagcaaagtcgagtatcacggctttcttttgcagatgtaatc
cggaaagtgtctgagttcaagaaggatcatcatgcttatatttcttctgatctagcagct
gttgagaggtacgtggtagtgcatggacagataatactacagctttttgctgagtttcca
gatcagaagatcaagaaatgtgcttttgtggtcggtttgactcgtatgatggaggagagg
caccatactaaatgggtagtgaacaaaaaagcaattgtgcaaaagtgtcattccaatttg
aatcctcgggctgcaatggatactgttgcttctggaacgtccaagaggaagcttatgcag
gcaacaacaacaagactgatcaacagaatatggggggaatattattcaaactattctcca
gaggatttgaaagagggaaatgattgtgatgtaaaagaagaagatgaacttgaggaacag
gatgaaaatgaagatgatgataaagaggtggtggtagagaaaacactaaaaccttattca
gtgtttgaacattgtaaatcccatacttcacaaaaagaggtaagatgggatgggaatcct
gtaagaaaaacatcttctggagaagacatttacaagcaagccattgtttgtggacaggtc
attgtggtgggggctgctgtcttagtagaggttgatgaaccagatgaacttcctgccatt
tattttgtggagtacatgtttgaaacaagaaatggaagtaaaatgtttcatgggagaatg
atgaagtggggatctgagacagttcttggtaacactgccaatgatagagaggttttctta
acaaatgaatgcatgaattataaactacaggatgttaagcaagcaataattctggaagtt
cgaaaaaggccttggggacatcatcacaggaaagataatgccaatgctgatagaattgat
agggaaaaggcagaagagaggaaaaagaaaggattgccactagaatattactgtaaaagc
ttgtactggccagaaaggggtgctttcttcactcttccatttgatactatgggtcttggc
tctggtgtctgccactcttgtaacttaaaaatatctgaagaagacaagaatatttccaaa
gtgaattcttctcaaacaggattttcatacaaaggaactgagtactcagtccatgatttt
gtctatgtgaaccctcatcaatttgccgtggaaagtggggagactgaaacttttaagggt
ggaaggaatgttggattgaagccttatgctgtgtgccagttattggaagtagttccaatg
gaaacaaaacaatctgaaacaagatccactgaggtcaaagttcaaagatttttcagacca
gatgatatttcacctgaaaaggcatattgttctgatattcgtgagatatattatagtgaa
gaaacacatcttttatctgttgaggtgattgaagggaaatgtgaagtcagaaagaaaatt
gatattcccacatgcagtgctcctgcaatctttgatcataccttcttctgcgagcacatg
tatgatccttccaatgggtccctcaagcagctaccagctcatatcaaatcaaagttttca
gctgtgagtaaagatggtgatgttgcaagtagaaagagaaagggaaagtctaaagaagga
gaaaatgatacagaagatgacaaacaattggaagcatctccagagtaccgtttggccact
ttggatatttttgctggttgtggtggcttgtctgagggattgcagcaagctggtgtctca
acaaccaagtgggctattgaatatgaagagcctgctggggaagcatttaaactcaatcat
gcagaatcattgatgtttattaataattgcaatgtgatcctcagggctgtgatggagagg
tgtggagatgcagatgactgtatttctacttctgaggctgctaaattggcttcatcactt
gatgcaaaggtgatcaatggtttgccattgccagggcaggtggatttcatcaatggaggg
cctccatgtcagggcttctctggaatgaataggtttaatcagagcacttggagtaaagtt
caatgtgagatgatcttagcattcttatcctttgctgattacttccgcccaaagtatttc
ctcttagagaatgtgaggaactttgtatctttcaataaaggacagactttccgtttaact
attgcttctcttcttcagatgggttatcaggtgagatttggaattttggaggccggagca
tatggagtttctcagtcacgcaaacgtgcctttatatgggcagcctctcctgaggagata
ctcccagaatggccagagccaatgcatgtttttgctgccccagagttaaaaataacattg
tctgagaagtcacaatatgctgctgttaggagtactgcttatggagcccctttccgtgca
ataactgtcagagatacaattggtgatctcccagatgtggcgaatggtgcttctaagaca
aatttggagtacggaaatgatcctatctcttggtttcaaaagaaaattcgaggcgacatg
gttgtcttgactgaccatatatcaaaagaaatgaatgagctgaatcttattagatgcaag
aatatcccaaagcggccaggtgctgattggcgtgatctcccagatgagaaggtcaaattg
tctactgggcaaatggttgatttgataccatggtgccttccaaacacagctaaacgacac
aatcagtggaaggggctatttggaagattggattgggaagggaacttcccaacatcaata
acagatccccagccaatgggtaaggtggggatgtgctttcaccctgagcaggacaggatt
cttactgttcgtgaatgtgcacgatctcaaggattcccagataactatcagtttttcggt
aacattcaacacaagcatcggcaaattggaaatgctgttcctcctcctctagcatatgcg
ttgggaaggaaacttaaggaagcactggatagtaagaggcagaaatag
DBGET
integrated database retrieval system
