Populus trichocarpa (black cottonwood): 7484347
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Entry
7484347 CDS
T01077
Name
(RefSeq) probable beta-1,4-xylosyltransferase IRX10L
KO
K20870
putative beta-1,4-xylosyltransferase IRX10 [EC:2.4.2.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7484347
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Structural polysaccharide
7484347
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Gene cluster
GFIT
Motif
Pfam:
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
7484347
NCBI-ProteinID:
XP_052301964
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Position
12:complement(12999432..13003592)
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AA seq
417 aa
AA seq
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MEIWKWVFVGVLWYAGFVLSTGAVELGRSQHTERISGSAGDVLEDDPVGRLKVFVYELPR
KYNKKILQKDPRCLTHMFAAEIFMHRFLLSSPVRTLNPDEADWFYTPVYTTCDLTTNGLP
LPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILPLLQ
RATLVQTFGQRNHVCLKDGSITVPPYAPPQKMQTHLIPEKTPRSIFVYFRGLFYDVGNDP
EGGYYARGARAAVWENFKDNPLFDISTEHPATYYEDMQRAVFCLCPLGWAPWSPRLVEAV
IFGCIPVIIADDIVLPFADAIPWEEIGVYVDEEDVPNLDTILTSIPPEVILRKQRLLANP
SMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDRSVYLRPGEKILNWTAGPVGDLKPW
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggagatttggaaatgggtttttgttggggttctttggtatgctggttttgtattgagt
actggtgctgtggagctgggcaggagtcaacacactgagaggatttcaggaagtgctggt
gatgttttggaagatgatcctgttggaaggctgaaagtttttgtctatgaacttccaaga
aaatacaataaaaagattctgcaaaaggacccaagatgcctcacccacatgttcgcagct
gagatctttatgcatcggtttctattatctagccctgttagaaccctcaatcccgatgaa
gctgattggttttatactcctgtatatacaacctgtgatttgacaacaaatggccttcct
ttgcctttcaaatcaccacgaatgatgagaagtgctatacagcttatttcttcaaactgg
ccctattggaatcggacggaaggtgctgaccacttttttgtagtgccacacgactttgga
gcatgcttccattatcaagaagagaaggctattgaaagaggaattcttcccttgctccaa
cgtgccaccttggtgcaaacttttggacaaagaaatcatgtttgcttaaaagatggttcc
attactgttcctccatatgctcctccacagaaaatgcaaacccacctgattcctgagaaa
actcctaggtcaatttttgtgtacttcagaggattgttttatgatgtaggaaatgaccca
gaaggtggctattatgcaagaggtgctagggcagcggtctgggagaacttcaaggacaat
ccgctttttgacatttccacagagcacccagcaacatattacgaagatatgcagcgagct
gttttctgtttgtgtccccttggctgggccccatggagtccaagattggttgaagcagtg
atatttggctgtatccctgttattatagcagatgacattgttttaccctttgctgatgca
atcccatgggaagaaattggggtatatgtagatgaggaagatgttccaaatttggacacc
atactcacttccattccacctgaagtaatattgaggaagcagagactgctcgctaaccct
tcaatgaagcaggctatgctattcccacaacctgcccaaccaggagatgctttccatcaa
gtattgaatggacttgcacgaaaattgcctcatgatagaagtgtttaccttaggccaggt
gagaagatcttgaactggactgcaggtccagttggtgacctgaaaccttggtag
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