Populus trichocarpa (black cottonwood): 7484361
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Entry
7484361 CDS
T01077
Name
(RefSeq) pectinesterase PPME1
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00040
Pentose and glucuronate interconversions
pop01100
Metabolic pathways
Module
pop_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
7484361
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
7484361
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GFIT
Motif
Pfam:
Pectinesterase
Motif
Other DBs
NCBI-GeneID:
7484361
NCBI-ProteinID:
XP_052301897
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Position
12:13265614..13279146
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AA seq
364 aa
AA seq
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MGSIAAIQCALTAILLVSTTVSSDDKSPIPADPSSLNTWFQDNVKPLADRKGTIDPALEA
AEAKPRTIKVRQDGSGEFKTLKDAINSIPTGNTERVIVDIGPGEYIEKLKIERSKPFVTF
LGSPSNKPTLSFDGTAKEYGTVYSATLEAEADYFVAANIIFKNSAPRPNGELKGEQAVAL
RISGDKSAFYNCRLIGFQDTLCDDKGRHLFKDCYIEGTVDYIFGSGKSLYLGTELHVIGD
ENGNFITAHARNSEAEDTGFSFVHCKVDGTGAKGAYLGRAWQARPRVVFSYTTMSSVVNP
EGWSNNFHPERDQTALFGEYKCEGEGANPAGRAKATKQLTPDQAAPFISLGFIEGSKWLL
HPPN
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgggttccattgcagctattcagtgtgcccttacagcaattcttcttgtttccaccacc
gttagttctgatgataaaagtccgatacctgccgatccatcgagcctaaacacatggttt
caagacaatgtcaagcccctggcagaccgtaagggcaccatagaccctgccctcgaagcg
gccgaggccaaaccaagaaccatcaaggttcgacaagatggaagtggagaattcaaaacc
ttgaaggatgccattaacagcattccaacagggaacacagaacgagtgattgtggatatt
ggacctggagagtacattgaaaaactcaaaatcgaacgtagcaaaccttttgttacattc
ttgggatcgcctagtaacaagccaaccttgtcatttgacggcacggcaaaagaatatgga
actgtttacagtgctaccttggaagctgaggctgattactttgtggctgctaatatcatt
tttaagaattctgcgccgaggccaaatggggaattgaaaggagaacaagcagttgctctg
aggatttctggggacaagtctgctttctataactgcagattaattggatttcaagacaca
ttgtgtgatgacaagggacggcatctcttcaaggattgttatattgaaggcaccgttgat
tacatttttggaagcggaaagtccttgtatttgggaacagagttacatgtgattggtgat
gaaaatgggaatttcatcactgcccatgcaagaaacagcgaggcagaagatactggattt
tcgttcgtgcattgtaaagtagatggcactggcgccaagggggcgtatttgggacgagca
tggcaggcaaggccacgagtggtcttctcatacactaccatgagcagtgttgttaatcct
gagggatggtccaataatttccaccctgaacgagaccagactgctttatttggagaatac
aagtgcgagggggaaggagctaaccccgcaggccgcgctaaagcgaccaagcagctaaca
cctgatcaagcagctcccttcatttctcttggcttcattgaaggttccaaatggctgctt
catcctccaaattaa
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