Populus trichocarpa (black cottonwood): 7484434
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Entry
7484434 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7484434
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7484434
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7484434
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
zf-RING_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
7484434
NCBI-ProteinID:
XP_024437739
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All DBs
Position
12:11526212..11531080
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AA seq
433 aa
AA seq
DB search
MGGILSRRSSSRHPSSSHSWSHHSYPQSPYAQPSQEYMQYQHYVPPPQSYGDPAPNSRRL
ERKYSKIDDNYNSLVQVTEALARAGLESSNLIVGIDFTKSNEWTGARSFSHRSLHHIGDD
QNPYEQAIYIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDERFCNGFEEVLRRYR
ELVPCLRLAGPTSFAPVIEMAITIVEQSGGQYHVLLIIADGQVTRSVDTEHGHLSPQEKR
TVEAIVKASEYPLSIILVGVGDGPWDMMKEFDDNIPARAFDNFQFVNFTEIMSKNMDRPR
KEAEFSLAALMEIPSQYKATLELNIMGATKGKAIDRVPLPPPQYGAGSTSFRNPKPAQSS
NSRPSASSSGRHDVVGTALPASSASDNHLCPICLTDPKDMAFGCGHQTCCDCGQDLQSCP
ICRSTIHTRIKLY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggatactctccagacgttcaagctctcgccatccttctagttcacactcatgg
agccatcacagctatccccagtcaccatatgctcaaccaagccaagaatatatgcaatac
cagcactatgtacctccacctcagagctatggtgatccagcaccaaattccaggaggttg
gagagaaagtattcaaagatagatgataattacaatagcctggtgcaggttactgaagcc
ctggcacgtgctggtttagagtcttcaaatcttattgtgggtattgatttcacaaaaagc
aatgagtggacaggtgcaaggtcattcagccacagaagcttgcatcacattggggatgat
caaaatccttatgaacaagcaatatatatcataggaaaaacactatcttcctttgatgag
gataacttaataccctgttttgggtttggagatgcatcaacacatgaccaagaagttttc
agtttttatccggatgagaggttttgtaatggatttgaagaagttttgagacgctataga
gaattggtcccctgtctacgacttgcaggaccaacatcttttgctcctgtcattgaaatg
gctattactatagttgagcaaagtggtggccagtaccatgttttacttataatagctgat
ggacaggtgacaagaagtgtcgacactgagcatggccatctaagcccgcaggaaaagaga
acagttgaagcaattgtgaaagcaagtgagtaccccttgtccattatattagttggggtt
ggagatggaccgtgggacatgatgaaggaatttgatgataacatccctgctcgggcattt
gacaatttccagtttgtgaattttacagaaataatgtcaaagaacatggaccggcctaga
aaagaagcggagttttctctagctgctttgatggaaataccttctcagtataaagcaacg
ctagagcttaatattatgggtgctactaaagggaaggctatagatagggttcctcttccc
cctccccagtatggtgctggttcaacttcattcagaaacccaaaacctgcccaatcaagc
aacagtcgtccaagtgcatcttcttctggcagacatgatgtggttggcacagcacttcct
gcaagttctgcttctgataatcatctttgtcccatttgcctcaccgaccctaaggatatg
gccttcggttgtggacatcagacatgctgtgactgtggtcaagatctccagtcatgcccc
atttgtcgaagcaccatccacaccagaataaagctctattaa
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