Populus trichocarpa (black cottonwood): 7484556
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Entry
7484556 CDS
T01077
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
7484556
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
7484556
Ion channels [BR:
pop04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
7484556
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Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
7484556
NCBI-ProteinID:
XP_002323883
UniProt:
B9IK38
B9IK02
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All DBs
Position
17:10315523..10322308
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AA seq
705 aa
AA seq
DB search
MSFSLSSWFRQSRGSVKYCNESKHSGSGSSSNNAVFDSTECYACTQVGVPVFHSTSCDSV
HQPEWQALAGSSLVPIHAKSDPISKPARCQTPNTKGPFGSILDPRSKWVKKWNRVLLLTR
GIALAIDPLFFYALSLSIGKGGAPCLYVNIGFAAIVTVARSCVDAVHLWHLWLQFRLAYV
SRESLVFGCGKLVWNARAIAYHYVRSLKGFWFDVFVILPIPQAIFWLLVPKLIREEKIKQ
VLTMLLVTFSFQFLPKVYHSFCLARRMRKVTGYIFGTIWWGFGLNLVAYLIASHVTGGCW
YVLATERVATCLKKQCERNGNCDLTLQCSMNVCYQFMYPADNYGNPCGRNSTWIAKPLCL
DDNGPFNYGIYSPALLVVSSNSLAVKILYPIFWGLLNLSSFGNELAPTSNLVEVMFSIYI
VLCGFTLFTLLIGNIQVFLHVVMAKNKKMQLRRQDVEWWMRRRQLPTGLRQRFRHFERQK
WRVMGGEDEMSWIEELPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKLLVYS
KDEKILREGDPVLRMVFIVHGRVKYSQCLSKGMVATSVLEPGGFLGDELLSWCLRRPFID
RLPASSATFVCMEPTEAFVLDAYDLRYISEHFRYRFASKRLKRTMRYYSSNWRTWAAVNI
QFAWRRYRIRKRGLATPDMVNVSMENRLRLCAAMFMSLRPHDHFQ
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctctctctctagctggtttcgacaaagtagaggtagtgtcaagtattgcaat
gaaagcaaacacagcggcagcggcagctccagcaacaatgctgttttcgattccacggaa
tgttatgcttgcactcaggttggtgtccctgtgtttcactccacaagctgtgacagtgtc
caccaacccgaatggcaagccttagctggatcctccctcgtacctatccatgccaaatcc
gatccgatatccaaacctgcccgctgtcaaaccccgaacacaaagggcccgtttgggtcc
atcctggatccacgtagcaagtgggtcaagaaatggaatagggtgctgctgctgacccgt
ggcattgcgctggccattgatcctcttttcttctacgcattgtcactgtcgattggaaaa
ggtggggccccttgtttgtatgtgaatattgggtttgcagcaatcgtgacagttgctcgt
tcgtgcgtggatgcggtgcatctttggcatctatggctgcaattcaggctggcgtacgtg
tcgagggagtcccttgtttttgggtgtgggaaactcgtgtggaacgcacgtgccattgct
tatcattatgtgaggtcactgaaaggattttggttcgatgtttttgttatcctgccgatc
ccccaggcaatattttggttgctggtaccaaaactaataagggaagaaaagattaagcag
gtcttgacgatgttattagtgactttctcattccaattccttcccaaggtctaccacagc
ttttgcttggctagaagaatgcggaaagtcacaggttatatatttggcacaatttggtgg
ggttttggactcaatctcgttgcctacctaattgcctctcatgtcacaggaggatgctgg
tatgttcttgcaacagaacgagttgcgacatgtctcaagaaacagtgtgaaagaaatgga
aactgcgatctcactttgcaatgctcgatgaatgtttgctatcagttcatgtatccagca
gataactatggaaacccttgtggcagaaactcaacatggattgctaagccgttgtgcctg
gatgataatggaccattcaattatgggatttattcgccagctcttctagttgtatccagc
aattctctagcagtcaagatcctttatcccatattctggggcttgttaaaccttagctct
ttcggcaacgaactcgctccaacaagtaacttggtagaagtgatgttcagtatatacatt
gtgctgtgtggtttcactcttttcactttactgataggaaacatccaggtatttttgcat
gtggtcatggcaaagaataaaaagatgcagctaagacgccaagatgtggaatggtggatg
aggagaagacagttgccaactggtttaagacaaagatttcgacatttcgaacgccaaaaa
tggagagtcatgggaggagaggacgagatgagttggattgaagaactgcccgaaggactc
cggagagacattaaacgctatctttgcctagacctcataaaaaaggtgcctttgtttcac
aacttggatgatcttatccttgacaacatctgtgatcgtgtcaagctccttgtctactca
aaagatgaaaagattttaagagaaggagaccctgtgctaaggatggtttttattgtgcac
ggacgtgtgaaatacagccaatgccttagcaaaggcatggtagccacaagtgtgcttgag
ccaggaggctttttaggtgatgagctgctctcgtggtgccttcgccgcccatttatagac
cgcctcccagcctcatccgcaacttttgtctgtatggaaccaacagaagcatttgttctg
gatgcatatgatctgagatatatctcagaacacttcaggtacagatttgccagcaagaga
ctcaagcgaacaatgagatattactcgtccaattggcgaacatgggcagccgtgaacatt
caatttgcttggcgacgatacaggattaggaagaggggactagcgactcctgacatggta
aatgtaagcatggagaaccgtcttcggctgtgtgctgcaatgttcatgtcgctgaggcca
catgaccacttccaataa
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