Populus trichocarpa (black cottonwood): 7484688
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Entry
7484688 CDS
T01077
Name
(RefSeq) 26S proteasome regulatory subunit 8 homolog B
KO
K03066
26S proteasome regulatory subunit T6
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
7484688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pop03051
]
7484688
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
7484688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
nSTAND3
AAA_16
AAA_5
AAA_22
RuvB_N
TIP49
Mg_chelatase
AAA_2
AAA_24
AAA_28
Parvo_NS1
RNA_helicase
NPHP3_N
IstB_IS21
ATPase
DUF815
AAA_3
AAA_7
AAA_33
AAA_11
bpMoxR
TsaE
AAA_18
AAA_25
ABC_tran
AAA_14
ResIII
Sigma54_activat
AAA_19
Zeta_toxin
SFTA2
PhoH
AAA_17
ORC-CDC6-like
NB-ARC
NACHT
Motif
Other DBs
NCBI-GeneID:
7484688
NCBI-ProteinID:
XP_002309241
UniProt:
B9H992
LinkDB
All DBs
Position
6:complement(13919414..13921907)
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AA seq
229 aa
AA seq
DB search
MADTLAKSFFFNMIGGIDHQIKKIKEVTELPIKHAELFESLGIAQPKGVLLYGPPGTGKT
LLARAVTHHIVCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIILMDEIDSIGSA
RMDSGSGSGDCEKRMEQIGETMRIINTVLMATNRIDILDQALLRPGRIDRKIEFPNPNED
SRQEILKIQSRRMSLMRGIDLKKIAEKKNGAELKVFLTHVYLSCATCFS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggccgacactctagcaaagagttttttttttaacatgattggtggtattgaccaccaa
ataaaaaagataaaggaggttactgaacttccaattaaacacgctgaattgtttgagagt
cttggaatcgctcaaccaaagggtgttctcctttatgggccacctggcacaggaaaaact
ctattggctagggcagtgactcatcacattgtctgtacgttcattagggtttctggctct
gaattagttcagaagtacattggagaaggctctagaatggtcagagagctttttgtaatg
gcaagggagcacgctccatcaatcattttaatggatgagattgacagcattggatctgca
cgaatggattctgggagtggcagtggtgactgtgagaaaagaatggaacaaataggggaa
actatgcgaattatcaacacagttttgatggccactaatcggattgatattcttgatcaa
gcgctcctaaggccaggacgaattgacaggaagattgaatttccaaatcccaacgaagat
tcacgtcaggagatcttgaaaatccaatcaagaagaatgagtttaatgcgtgggattgat
ttgaagaagatcgctgagaagaagaatggtgcagagctgaaggtatttttaacccatgtc
tatttatcttgcgccacttgcttttcttga
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