Populus trichocarpa (black cottonwood): 7484721
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Entry
7484721 CDS
T01077
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
7484721
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
7484721
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Structural polysaccharide
7484721
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
7484721
NCBI-ProteinID:
XP_002317951
LinkDB
All DBs
Position
12:7739612..7743491
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AA seq
509 aa
AA seq
DB search
MCRIERKCGGGGGEKDKETMGVVKGVEKIRSSISRPSSKMKLWMIRATTSVLLWTCVVQL
TTIGEMWGPRVLKGWPSCWPPQSVSAALQENVPTVPARVLPPKRVYKNNGYLMVSCNGGL
NQMRAAICDMVAIARYLNVTLIVPELDKTSFWADPSEFQDIFDEEHFITSLRDEVRILKE
LPPRLKQRVELGMTYTMPPVSWSDISYYHNQILPLIKKYKVVHLNRTDARLANNRQPLEL
QKLRCRVNYSSLRFTTQIEELGKRVIRLLRQNGPFLVLHLRYEMDMLAFSGCSQGCNNEE
VEELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALTLRALDIDPNIQVYIAAGEIY
GGERRMSSLASAYPKLVRKETLLEPSDLRYFQNHSSQMAALDYLVALESDIFVPTYDGNM
AKVVEGHRRFLGFKKTILLDRRLLVDLIDRYTNGSLNWDEFSYAVKESHSDRMGGPMKRL
VIPDRPKEEDYFYSNPEECLQSSDDPLST
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagaatagagagaaagtgtgggggaggaggaggagagaaagataaggagactatg
ggggtagttaaaggagtggaaaagattaggagtagtatatcaaggccgtcttcaaaaatg
aagctgtggatgataagggcaacgacgtctgttttgttgtggacttgtgtggttcaattg
acgacgatcggtgagatgtggggtcctagggttttgaaaggttggccttcttgttggcct
ccccaatctgtctctgccgccttgcaagagaatgttcctactgtccccgctcgcgttttg
ccaccaaagagggtttataagaacaatggatacttgatggtctcgtgcaatggaggtctc
aatcaaatgagagcagcgatatgtgatatggttgctatcgcgagatatttgaatgttacg
cttatagtaccagagctggataaaacctctttttgggctgatcccagcgagttccaagac
atatttgatgaggagcattttatcacatcattgagagatgaggttcgaatattgaaggaa
ctgcctcctaggttgaagcagagagtggaactggggatgacctataccatgccaccagtt
agttggtctgatatttcttactatcataaccagattcttcctttgataaaaaagtacaaa
gttgtacatctaaatagaactgatgctcggcttgccaataatcgccagcctttagagctg
cagaagttgcgctgccgtgtgaattatagttctctgagattcaccactcaaatagaggag
ttgggcaagagagttataaggcttctgaggcaaaatggtcccttcttggtgcttcacctt
cgatatgaaatggacatgctggcattttctggctgtagtcaaggttgcaacaatgaagag
gtggaagaattgacaagaatgagatatgcttatccttggtggaaagaaaaaataataaat
tcggacttgaagaggaaagatgggttgtgtcctttgactcctgaggaaacagctctcact
ttgagggcactggacattgatccgaatatccaggtttatattgcagctggtgaaatatac
gggggtgaaaggagaatgtcaagtcttgcgtcagcttatccaaaactggtcagaaaggaa
acactgttggaaccatcagaccttaggtacttccagaatcactcatctcaaatggcagca
ttggattatcttgttgcgttggaaagtgatatttttgtccctacctatgatggaaacatg
gctaaagttgttgaaggccaccgcagattcctcggctttaagaagacaattttattggat
agaaggcttttggttgatctgatagatcgatacactaatggatcgctgaactgggatgaa
ttttcatatgctgtaaaagaatcccattctgatcggatggggggaccaatgaaaaggttg
gtgatcccagacaggcctaaagaagaggattacttctattcaaacccagaagaatgtttg
cagtcatcagatgatccgttgagtacatga
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