Populus trichocarpa (black cottonwood): 7484871
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Entry
7484871 CDS
T01077
Name
(RefSeq) ubiquitin-conjugating enzyme E2 27
KO
K04649
ubiquitin-conjugating enzyme (huntingtin interacting protein 2) [EC:
2.3.2.23
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
7484871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7484871
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.23 E2 ubiquitin-conjugating enzyme
7484871
Ubiquitin system [BR:
pop04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
7484871
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
UBA
UBA_7
UEV
RWD
Motif
Other DBs
NCBI-GeneID:
7484871
NCBI-ProteinID:
XP_002318760
UniProt:
B9I3X3
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Position
12:complement(12623775..12626659)
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AA seq
194 aa
AA seq
DB search
MIDFARVQKELQECSRDMEASGIKVAPKSDNLARLTGTIPGPISSPYEGGTFQIDITLPD
GYPFEPPKMQFATKVWHPNISSQSGAICLDILKDQWSPALTLKTALLSVQALLSAPEPDD
PQDAVVAQQYLRDHQTFVGTARYWTETFAKTSSLGVEEKVQKLVEMGFPEALARSALESV
GGDENSALEKLCSG
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgatcgactttgctcgtgttcaaaaggagctgcaagaatgcagcagagacatggaggct
tctggcatcaaagtggcacctaaatctgacaatcttgctcgattaaccggaactattcct
ggtcctatcagctctccttatgaaggtggcacttttcaaattgatatcactctcccagat
ggatacccctttgagcctccaaaaatgcagtttgcaacaaaagtctggcaccctaatatt
agcagccaaagtggggcaatctgcctggacattttgaaggaccagtggagcccagcactc
accctaaagacagcacttctttctgtccaagcattgctctctgctcctgaacctgacgat
cctcaagatgctgttgtagcacaacagtatcttagagaccatcagacctttgttggcaca
gctcgctactggacagaaacttttgccaagacctcatcgcttggggttgaggaaaaggtt
caaaaacttgtggagatgggtttccctgaagctctggcgagaagtgcactagaatctgtt
ggtggtgatgaaaactcggctcttgaaaagctttgttctggttaa
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