Populus trichocarpa (black cottonwood): 7484920
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Entry
7484920 CDS
T01077
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin 1
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
7484920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7484920
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
7484920
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrillarin
GCD14
Methyltransf_31
PCMT
Methyltr_RsmB-F
Motif
Other DBs
NCBI-GeneID:
7484920
NCBI-ProteinID:
XP_002318803
UniProt:
A0ACC0S850
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All DBs
Position
12:15528868..15532470
Genome browser
AA seq
309 aa
AA seq
DB search
MAPPRGRGGSGGGFRGGRGDGGGRGRGRGFGGGRGGGGGRGSAMKTRGGGGRGRGGGRGR
GGGGMKGGSKVVVEPHRHEGVFIAKGKEDALVTKNMVPGETVYNEKKISVQNEDGTKVEY
RVWNPFRSKLASAILGGVDDVWIKPGAKVLYLGAASGTTVSHVSDIVGPTGVVYAVEFSH
RSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFL
KSGGHFVISIKANCIDSTVPAEAVFESEVKKMVQEQLKPTEQVTLEPFERDHACVVGGYR
MPKKQKVAA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggctcccccaagaggacgaggtggcagtggtggtgggttcaggggaggcagaggtgat
ggaggaggaagaggcagaggcagaggttttggaggaggaagaggaggtgggggtggaagg
ggtagtgccatgaaaaccagaggtggtgggggaagaggccgtggtggtggaagaggccgt
gggggtggaggaatgaaaggtgggagcaaggttgtagtggagcctcatagacatgaaggg
gtgttcattgctaagggtaaagaagatgctcttgttactaagaatatggttcctggtgaa
actgtctacaatgagaagaagatctctgtccagaatgaagatggaactaaagttgaatac
agggtttggaaccccttccgatcaaaattggcttctgccattcttggtggtgttgatgat
gtttggatcaaacctggcgctaaagttctttacctgggtgctgcttctggcactactgtt
tctcatgtatctgatattgttggccctactggagtggtatatgcagtagaattttctcac
agaagtggcagagacttagttaacatggcaaagaaacgcaccaatgtaattcccatcatt
gaagatgccaggcatcctgccaagtaccgcatgctagttggcatggttgatgtgatcttt
tctgatgttgctcagcctgatcaggcaaggattttagcactcaatgcttcctattttctg
aagtctgggggtcattttgttatttcaataaaggcaaattgcatagattccactgtccct
gccgaggcagtatttgaaagtgaagtgaaaaagatggtgcaggagcagttgaagcctact
gaacaggtgaccctcgagccgtttgagcgagaccatgcctgtgtggttggtggctaccgt
atgccaaagaaacagaaagttgctgcttag
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