Populus trichocarpa (black cottonwood): 7485167
Help
Entry
7485167 CDS
T01077
Name
(RefSeq) glutamine synthetase nodule isozyme
KO
K01915
glutamine synthetase [EC:
6.3.1.2
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00220
Arginine biosynthesis
pop00250
Alanine, aspartate and glutamate metabolism
pop00630
Glyoxylate and dicarboxylate metabolism
pop00910
Nitrogen metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01230
Biosynthesis of amino acids
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
7485167
09102 Energy metabolism
00910 Nitrogen metabolism
7485167
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
7485167
00220 Arginine biosynthesis
7485167
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7485167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7485167
Enzymes [BR:
pop01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.2 glutamine synthetase
7485167
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
7485167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gln-synt_C
Gln-synt_N
Motif
Other DBs
NCBI-GeneID:
7485167
NCBI-ProteinID:
XP_002318305
LinkDB
All DBs
Position
12:3942177..3945416
Genome browser
AA seq
356 aa
AA seq
DB search
MSLLSDLINLDLSDTTDKIIAEYIWIGGSGMDLRSKARTLNGVVSDPHKLPKWNYDGSST
GQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRYNAAKIFSHPDVV
AEVPWYGIEQEYTLLQKDLKWPIGWPVGGYPGPQGPYYCGAGADKAFGRDVVDSHYKACL
YAGINISGINGEVMPGQWEFQVGPSVGISAGDELWVARYILERITEIAGVVVSFDPKPIP
GDWNGAGAHTNYSTKSMRNDGGFEVIKKAIGKLQLKHKEHIAAYGEGNERRLTGRHETAD
INTFSWGVANRGASVRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIADTTILWKP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcttgtctgatctcatcaacttggacctctctgatactactgataagatcatt
gcagaatacatatggatcggtggatctggtatggatcttagaagcaaagccaggacactt
aatggagtagtgagtgatcctcataagcttccaaagtggaactatgacggttcaagcacc
ggccaagctcccggagaagacagtgaagtcatcttatacccacaagcaatattcaaggac
ccatttaggaggggcaacaacatcctagtgatgtgtgatgcttacactccagcaggagag
ccaatcccaactaacaagagatacaatgcagcaaaaattttcagccatccagatgttgtt
gctgaggtgccctggtatggtatagagcaagagtacaccttgttgcaaaaagatttaaaa
tggccaattgggtggcctgttggtggttatcctggacctcagggtccttactactgcggt
gctggtgctgataaggcttttggccgtgatgttgttgactcccactacaaggcatgcctt
tatgctggaatcaacatttctggcatcaacggggaagtgatgcctggccaatgggaattc
caagttggcccttctgttggcatctcagctggagatgagttgtgggttgcccgttacatt
cttgagaggatcacagagattgctggagtggtcgtttcctttgacccaaaacctatcccg
ggagactggaatggagctggtgcccacacaaactacagtaccaagtccatgagaaatgat
ggagggtttgaagttatcaagaaggccattggaaaacttcaattgaagcataaggaacac
attgctgcttacggagaaggcaatgagcgtcgtctgactggtcgccatgaaacagctgac
atcaacaccttctcttggggtgtggcgaatcgtggagcttcagttagagttggcagggat
acagagaaagctgggaaaggttacttcgaagacagaaggcctgcttccaatatggatcct
tatgttgtcacctccatgattgcagacacgaccattctctggaagccataa
DBGET
integrated database retrieval system
