Populus trichocarpa (black cottonwood): 7485188
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Entry
7485188 CDS
T01077
Name
(RefSeq) transcription factor MYB54
KO
K09422
transcription factor MYB, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7485188
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
7485188
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
DUF3871
Myb_DNA-bind_7
DUF6581
Motif
Other DBs
NCBI-GeneID:
7485188
NCBI-ProteinID:
XP_002318324
UniProt:
B9I4W4
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All DBs
Position
12:3516416..3518365
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AA seq
243 aa
AA seq
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MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSPFT
EEEEERLLASHRIHGNRWAIIARFFPGRTDNAVKNHWHVIMARRYRERSRLHAKRAAQTL
VNDNKLSSKQDHMHMDCETRNFSSFSKKYCEKYGQYPMVTHSYLPAFCKEFYNEDPSHCE
DQSRPIEFYDFLQVNTDSNKSEVIDNARRDDEEVDQQEALENNQSKADVPFIDFFSVNGK
SSS
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtgcactagaggacattggaggcctgctgaggatgagaaacttaaggaattggttgaa
aagtatggtcctcataattggaacgccattgccgaaaagcttcaaggaagatcagggaag
agttgtaggttgagatggtttaatcagctggatccaagaatcaatagaagcccgtttaca
gaagaggaagaagaaagactacttgcttcccacaggattcatgggaatagatgggcaatt
attgcaagatttttccctggtcgcaccgataatgcagtgaagaatcattggcatgtcatc
atggcaagaagatatagagagaggtctagacttcatgcaaaaagggctgctcaaactttg
gtaaatgataacaaattatcctcaaaacaagatcacatgcacatggattgtgagacgagg
aatttttcttcattttccaagaaatattgtgaaaaatatggccaatatcctatggttact
cacagctacttaccggccttttgcaaagagttctacaatgaagatccaagtcattgtgaa
gatcaaagtcggccgattgagttttatgattttctccaagtaaacactgactccaataaa
agtgaagtgatagacaatgcaagaagagatgatgaggaggtagatcagcaggaagccttg
gaaaataatcagagcaaggctgatgttccattcattgattttttctctgttaatggcaaa
tcctcatcataa
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integrated database retrieval system
