Populus trichocarpa (black cottonwood): 7485198
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Entry
7485198 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7485198
KO
K14849
ribosomal RNA-processing protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
7485198
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7485198
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
7485198
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
7485198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
7485198
NCBI-ProteinID:
XP_024438600
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Position
12:3285536..3289320
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AA seq
564 aa
AA seq
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MEEELHIQAQTSKALIKQLASSDTKTRNKSLKILLNKWLPSQPQISEETMKKIWKGLFYC
MWHADKSLAQNQLINKLSSLLTVIEVESVCFSYFSVFLVTMRREWSGIDGLRLDKFYLLI
RRFVNSFFGFLKKKGWGLDVVERFMRVFVEKGFLADDNFLGNGVNYHVVSVFVEELKGFL
PVKEAALEVIFGNFVGVMGKVSDKVLLGKIKSNVFDLLLRMGKELLEVKIKGDDVGDNDE
VVILGSIALVMGFSKRFYELGSSVECCQGNRKVVLGLHEVFLKLEKDFVASGIKIALPES
NGDEDEEEVPALVPIDSGMGVEGLNGDVANGPGSKKLKKSKKAKESDGNSKKAKKKKRNV
ISGSHSESDSMADENGYEDLPNGENSSKEKTVDDNLVRFDESAIANLQRQFEKVAAEVGI
DEGVTSVCDFPKVTGNGNLSKKRKRAKRVELKQSENQESNGQEDDEAGTSTMAKSTEKSA
KKVRFSMKNNLIWKPSTPLPPQSLRIPPSVTPRGSALKKGIPPGPVREMPAKKNMKQRAK
SMKKVIKGISPATKRVKKLKSLAV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaactccacatccaagctcaaacgtcgaaagccctaataaaacaactagca
tcaagcgacacaaaaacccgaaacaagtccttaaagattctcttaaacaaatggttacct
tcacaacctcaaatctctgaagaaactatgaagaaaatatggaaggggctgttttactgt
atgtggcatgctgacaagtctttagctcagaaccaactaatcaacaaattgagttcttta
cttactgttattgaagttgaatctgtttgttttagttatttctctgtttttttagttact
atgagaagggaatggtctggtattgatgggttgaggttagataagttttatcttttgatt
aggagatttgtgaattctttttttggtttcttgaaaaagaaggggtggggtttggatgtt
gtggaaaggtttatgagggtttttgtggaaaaaggatttttagctgatgataatttttta
gggaacggtgttaattatcatgttgtttcggtttttgttgaggaattgaagggttttttg
ccggtgaaggaggcggctttggaggtgatttttgggaattttgtgggtgtaatggggaag
gtgagtgataaggttttgctggggaagattaagagtaatgtgtttgatctgttgttgcgg
atggggaaggaattgttggaggtgaagattaagggggatgacgttggggacaatgatgag
gtggtgattttgggttcaattgctttggtaatggggttctccaagaggttttatgagttg
ggttcttcagtcgagtgttgtcaagggaataggaaagtggttttggggttacatgaagtg
tttttgaagttagagaaggatttcgtggcctcagggatcaagattgcacttccagagagt
aatggtgacgaggatgaagaggaggtgccagctttggttcctattgatagtggtatggga
gtggaaggtttgaatggtgacgttgctaatgggcctggtagcaagaaattgaagaaaagc
aaaaaggcaaaggagtcggatggcaatagcaaaaaggctaagaagaagaaaaggaatgtc
atttccggttcccacagtgagagtgattctatggctgatgagaatggttatgaggattta
ccaaatggggagaattcaagcaaagaaaagactgtggatgataatttggtaaggtttgat
gaatctgccatagcaaatcttcagaggcaatttgagaaagttgccgcagaagtgggcata
gatgagggtgtcactagtgtctgtgattttcctaaagtcactggcaacggtaatctttcc
aaaaagagaaagagagcgaagagggtggaattgaagcaatctgaaaatcaagaatcgaac
ggccaagaagatgatgaagctggcacaagcacaatggcaaagagcactgagaagagtgca
aaaaaagtccggttttctatgaaaaacaacttgatctggaagcccagcactcctttacca
ccacaaagtttgagaataccgccttctgtgacccctagaggaagtgcacttaaaaaaggg
atacctccgggtccagttagggagatgcctgcaaagaaaaatatgaaacaaagagcgaaa
tccatgaagaaagtaatcaaaggcatttcccctgccactaagcgcgtaaagaagttaaaa
tcacttgccgtctag
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