Populus trichocarpa (black cottonwood): 7485264 Help Entry 7485264           CDS       T01077                                  Name (RefSeq) autophagy-related protein 11   KO K08330   autophagy-related protein 11 Organism pop  Populus trichocarpa (black cottonwood) Pathway pop04136   Autophagy - other Brite KEGG Orthology (KO) [BR:pop00001]  09140 Cellular Processes   09141 Transport and catabolism    04136 Autophagy - other     7485264  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pop04131]     7485264    03029 Mitochondrial biogenesis [BR:pop03029]     7485264 Membrane trafficking [BR:pop04131]  Autophagy   Cytoplasm to vacuolar targeting (CVT) pathway    Scaffold protein     7485264   Mitophagy    Scaffold proteins     7485264 Mitochondrial biogenesis [BR:pop03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     7485264 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  ATG17_like ATG11 IKKbetaNEMObind Motif Other DBs NCBI-GeneID:  7485264 NCBI-ProteinID:  XP_002308415 UniProt:  B9HB54 LinkDB All DBs Position 6:complement(18722490..18729451) Genome browser AA seq 1157 aa AA seqDB search MSSSITEGLVNQTRLVVHIAENGHSLELVCDETTHVEAVMRYIEKVARINFNDQLVLCLE KKLEPQQPLSAYKLPSSDGEVFIFNRARMQTNPLPPPLEQIDVLEIADPPPPPSSHDPHP LDDAPDPALRVLPSYEKQFRYHYHRGYAIYSRTQVKHEHCLRLLTEQKVQERAMEVARIN VQQFYRAILQNYSEFIKRYTQQHRIHLDLLTNFERDLEKLRSIKLHPALQSDSRKCLVDF VKEDNLRKAVDNCSHSHRQFEKKVLEFKQKFGDAKRKVEELFSCGASSSIRNLDLAIKER QPAINEMKSIMQSLRDDVSTVKELVHDCLSCQLSSTRLHTEVSALGLMYDVHEKSHLPTM LAVGDLISKLLGFCKDKKNEMNIFVHDFLQKIAYVTFLMKDVKLRFPVFREAMLRQDDIF RDLKLFHGIGSAYRGCLAEVVRRKASMKLYMGMAGQLAEQLATRREVEVRRREEFLKAYS SYIPRDILASMGLYDAPNQCDVNISPFDTNLLDIDISDLDRYAPDYLVGLPSKSDKTATL KGSLSMSNDSSRSAEMEEIGEEALEKDCSEEPLEGCELLEIAGTSKMEVENAKLKAELAS AIALICSLCPEIEYESMDESTVGSLLKNADKTTEALRLKDEYGKHLQSLLKAKQIQCMSY EKRIQELEQRLADQYLQGQKLSNSKDASDYALLAAKTEDFKPEISSGEAPMPYAMTSEPM DEVSCISNSLNSKLGLFTRQPSKDREGFDENMMDSSGMFNTQLDSSMVEPHREELQVCDK DGKGKMVGQLGMSLTNSSTAESMPEPLDVSPSDAVAEPKVSGDHGIMLELQNALAENSKQ LSETEAKLKAAVEEAAMLTRELEMSQKLLDESQMNCAHLENCLHEAREEAQTNLCAADRR ASEYNKLRASAVKLHGLFERLRCCVCAPGGVAAFADSLRALAQSMANSSNDKDDEGAAEF QKCISVLADKVGLFLSTHRAELLDKYPKLEAANEQLGKELEEKKELVVTLYKKHQLEKQA NKERISFSRFEVHEIAAFVLNSAGHYEAINRNTSNYYLSAESVALFTDHLPSRPSYIVGQ IVHIERQAVKPLLPTSTRPEHGKVDEVDLLTTDQGTDRLNFNLGPTSNPYNLPIGCEYFV VTVAMLPDSTIHSAPPS NT seq 3474 nt NT seq  +upstreamnt  +downstreamnt atgagttcaagcatcacagagggtttggtaaatcagaccaggctcgtagttcatatagca gaaaatggtcattcacttgaacttgtttgtgatgaaacaacgcatgtggaggcggttatg cgttatatcgaaaaagttgctaggattaacttcaatgaccagcttgttctgtgtttggaa aagaaacttgaacctcagcagccgctttctgcttacaagcttccatctagcgatggggaa gtgtttatatttaacagagcaaggatgcaaaccaatccccttccccctccactcgaacaa attgatgtacttgaaattgcagaccctccaccaccaccttcttcgcatgacccccatcct ttagatgatgctccagacccagctttgagggttttgccttcttatgagaaacaatttagg taccattaccataggggctatgcaatttatagtagaacccaagtaaagcatgaacattgc ctgaggttattgacggagcaaaaggttcaggagagggcaatggaggttgctaggattaat gtgcagcaattctacagggcaattcttcagaactactcagagttcatcaagcgttataca caacaacacaggatacatttagatcttttaacaaattttgagagagatttagagaaactg agatcgatcaagcttcatccagccttgcaatctgattcacggaaatgtttagtcgatttt gtgaaggaagataacttgaggaaggccgtggataattgtagccattcacataggcagttt gagaagaaggttttagagtttaagcaaaagttcggtgatgcaaagcgcaaagtggaagaa ttattttcttgtggagcttcgtcatctattaggaatttagatcttgccatcaaggagcgt cagccagccatcaatgaaatgaagagcataatgcagtctttgagagacgatgtaagcacg gtaaaggaacttgtgcatgattgtctgtcatgccagttgtcctcaactcgtctccatact gaagtttcagccctgggtcttatgtatgatgtccatgaaaagagtcatttgcccaccatg ctggctgttggtgatttaatttccaagctgcttggtttttgcaaggataagaagaacgag atgaacatctttgtgcatgatttcctacaaaagattgcctatgttactttcctcatgaaa gatgtgaagttaaggtttcctgtttttagagaggcaatgttgcgtcaggatgatattttt agggacctaaaactattccatgggattggttctgcatacagaggctgccttgctgaagta gtgagaagaaaggcttctatgaaactttacatgggcatggctggacaactggctgagcag cttgctacaaggagggaggttgaggttaggagacgggaggagtttctgaaagcatacagt tcatatataccaagagatatattagcatcaatggggttatatgatgctcctaatcagtgt gatgtcaatatatctccatttgacactaatttgcttgacattgacatctcagacttggac cgttatgctcctgattatttggttggacttccttcaaaaagtgacaagactgcaactttg aaaggctcattgtctatgtctaatgacagttctcgctcagctgagatggaagaaattggt gaggaagcacttgagaaagattgctctgaggagcccctcgagggctgtgagttgttagag attgctggaactagcaagatggaagttgagaatgcaaaactgaaagctgaactagcttct gcaatagccttgatatgttccctttgcccagaaattgaatacgagtcaatggatgaaagt acagtgggtagtctattgaagaatgcagataagacaactgaagccttgcggctgaaagat gagtatggaaagcatctccaatctttgcttaaggcaaagcaaatacagtgtatgtcatat gagaagcgcattcaagaactagagcagagattggctgaccagtatttgcaggggcagaaa ctttcaaatagtaaagatgcatcagactatgctcttttggctgcaaagactgaagacttc aaaccagaaatttccagtggtgaagcacccatgccttatgcaatgacctcagagcccatg gatgaggtttcttgcatttctaattctttgaattcaaagctggggcttttcaccaggcaa ccaagcaaagatagagaagggtttgatgaaaatatgatggactcgtctgggatgttcaat actcagttggattcatcaatggtggagccacatcgtgaagagctgcaagtttgtgataaa gatgggaagggtaagatggtgggacaactgggcatgtcactgacaaacagttccacagct gagagtatgccggagcctctcgatgtctctccttcagatgcagttgctgagcctaaagtc agtggtgaccatggaattatgttagaattgcaaaatgcacttgcagaaaattcaaaacaa ttgagtgaaactgaagcgaagctcaaggctgctgtcgaggaggctgccatgcttactagg gagttagaaatgagtcagaagctccttgatgaatctcagatgaattgtgctcacttggag aattgcttgcatgaagcaagagaggaagctcaaaccaatctttgtgcagctgaccggagg gcctcagaatataataaactgcgtgcatctgctgtgaaactccatggcctttttgaaaga cttaggtgctgtgtatgtgctcctggtggagttgctgcttttgctgattctttgcgtgct ttagctcaatctatggccaattccagcaatgacaaagatgatgagggtgctgctgaattc cagaaatgcattagtgtccttgcagataaagttggtttattcttgtccacacaccgcgca gagctgcttgacaagtacccaaagcttgaagctgcaaacgaacagcttggaaaagaattg gaagagaagaaagagctggttgtcactttatacaaaaagcatcaacttgagaagcaggca aacaaggaaaggatatcctttagccgttttgaagtccatgagattgctgcatttgttctg aactcagctggacattatgaggctatcaaccggaacacctctaactactacctgtctgct gaatctgtggccctgttcacagaccatctcccaagccgccccagctacattgttgggcag atagtgcatatagaacgccaagctgtaaagccattgcttcctacctcaacgaggcctgag catggcaaggtagatgaagtggatcttctgaccactgaccaagggactgaccgtttgaac ttcaatttgggaccgacttccaacccatacaatcttcctatcgggtgtgaatactttgta gtgacagtagccatgttaccggattcaaccattcattcagcgcctccttcctga

DBGET integrated database retrieval system