Populus trichocarpa (black cottonwood): 7485422
Help
Entry
7485422 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7485422
KO
K07478
putative ATPase
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
7485422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
UBA_7
Sigma54_activat
AAA_16
AAA_5
IstB_IS21
Mg_chelatase
UBA
AAA_22
AAA_14
AAA_19
nSTAND3
AAA_2
AAA_30
DUF815
ResIII
DNA_pol3_delta2
TniB
AAA_7
AAA_11
Sigma54_activ_2
Bac_DnaA
Parvo_NS1
AAA_18
RCF1-5-like_lid
TIP49
SLFN-g3_helicase
AAA_24
NPHP3_N
MCM
AAA_3
NACHT
AAA_28
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
7485422
NCBI-ProteinID:
XP_002316599
LinkDB
All DBs
Position
11:1763858..1766288
Genome browser
AA seq
555 aa
AA seq
DB search
MEMEQLLSMGFPSELAAQALAATGGKSTVKATEWILSQTSHPHPNNSPNGSSFQQPKLDR
FFHFPSSKPKQEPSSPSNSPTQTTTAPPPPPPHHQVLSAQTPPPSKRPKVFAPSPPSNPH
NHTISNDEPLAERMRPRTIDDVIGQDLLLSQNSLLRSAIRCSRIPSIILWGPPGTGKTSI
ARAIVTSANSQGSSSYRFVSLSAVTCGVKDVRDAFEDARKFKLKNSKRTVLFLDEVHRFN
KSQQDSFLPVIEDGTIVFIGATTENPSFHLVTPLLSRCRVLTLSPLKPHHVQTILKRAVN
DPDKGLSKSLGSLRVDVSEDAVEFLSTNCDGDARVALNALEISAVAAAARVGSDGDLRLA
SVALDDAKEALQSKHLAYDRAGEEHYNLISALHKSMRGSDADASIYWLVRMLEGGEQPLY
IARRLVRFASEDVGLADPLALNQAVACYQACHFLGMPECNVILAQCVAYLALAPKSISVY
RAMGAAQKVVRESVGQNEGVPLHLRNAPTKLMKELGYGKDYIYTPDNPTANQSFLPPSLQ
GYKFLDWPASNANNG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggagatggagcagctactgagcatgggttttcctagtgaattggcggctcaagctctg
gccgccaccggtggcaaatcaacagtgaaagccaccgagtggattctctcccaaacatct
catcctcatcccaataatagcccaaatggatcatcattccagcagccaaaactagaccgc
ttctttcatttcccatcatcaaaaccaaaacaagaaccctcctccccctccaattccccc
acccaaacaaccaccgcaccaccaccaccaccacctcatcatcaagtactatcagcccaa
actcctcccccttctaaacgtcccaaagtattcgctccatcacccccctcaaatccacat
aatcatactatcagcaatgatgagcccttggccgaacgcatgcggcctcgcaccattgat
gatgttatcggccaggacctccttctttcccaaaactccctcctccgctctgctattcgt
tgcagccgcatcccttctatcatcctctggggcccacctggaactggtaagacatccatt
gctcgtgccattgtcacttctgctaactctcagggctcttcctcctaccgttttgtctct
ttgtctgctgttacttgtggggttaaggatgttagggatgcttttgaggatgctaggaaa
tttaaactcaagaatagtaaaaggactgttctttttctagatgaggttcataggtttaac
aagtcccagcaggattctttcttgcctgttattgaagacggtaccattgtgtttattggg
gccactactgagaatccttcttttcatttggttacgccattgctttctcgctgtagggtt
ctcacgcttagccctttaaagcctcaccatgttcaaaccattttgaagcgcgcggtgaat
gatcctgacaagggattgtccaagagcttagggagtttgagagttgatgtgagtgaggac
gctgttgaatttttatccacgaattgcgatggtgatgcacgtgtggcgttgaatgccttg
gaaatttctgctgtagctgcagctgcccgagtgggaagtgatggtgatttgaggttggcc
agtgttgcattggatgatgccaaggaggcgcttcagagcaagcatcttgcttatgataga
gcaggggaagagcattacaatctcatcagtgcacttcacaagtctatgagaggaagtgat
gcagatgcatccatttattggttggtgaggatgttggaaggaggcgaacagcctctttat
attgcgaggcgtttggtaaggtttgcaagtgaggatgttggcttggctgatcctttagca
cttaaccaggctgttgcttgctaccaagcttgccatttcttgggcatgcctgagtgcaat
gtgattcttgctcagtgtgtagcttacttggctttggctccaaaatccatttctgtctat
cgagcaatgggggctgcacagaaggttgttagagaatctgttggacaaaacgagggagtg
ccgcttcatttgagaaacgcgcctaccaagttgatgaaagagcttgggtatgggaaggac
tatatctacactcctgataaccccaccgcaaaccagagctttttaccaccttcactccag
ggctacaagttccttgattggccagccagtaatgccaataatggataa
DBGET
integrated database retrieval system
