Populus trichocarpa (black cottonwood): 7485469
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Entry
7485469 CDS
T01077
Name
(RefSeq) axial regulator YABBY 5 isoform X1
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7485469
Transcription factors [BR:
pop03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
7485469
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Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
Ccdc124
HMG_box
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
7485469
NCBI-ProteinID:
XP_002308074
UniProt:
B9HAJ0
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All DBs
Position
6:4958574..4962716
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AA seq
188 aa
AA seq
DB search
MSSCIDAVPNEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNIWSVNMAAAFQSL
SWQDQVQASNYNSHDYRIDLGSSSKCNNKISMRTPAANIVTQERVVNRPPEKRQRVPSAY
NQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQTKVDDGSEKRLM
SRSALQNN
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagctgcatcgatgcggtgcctaatgagcaactctgctacatcccttgcaacttt
tgcaatatagttcttgcggtgagtgttccatgcagcagcttgtttgacatcgtgaccgtc
cgatgtgggcactgcaccaatatatggtccgtgaatatggcagctgcctttcagtcactg
tcatggcaagatcaagttcaggcatcgaactacaactcccacgattacagaattgacctg
ggatcctcctccaaatgcaacaacaagatctcaatgagaaccccagctgccaacattgtc
actcaagaaagggttgttaatcgccctcccgagaagaggcagcgagtaccttctgcatat
aatcagttcataaaagaggagattcagaggatcaaggccaataatcctgatatcagtcac
agagaagctttcagcactgctgccaaaaattgggcacacttccctcatattcattttgga
ttgatgttggagactaacaaccaaactaaggtggatgatggcagtgagaagcgtctaatg
tcaaggtctgcactgcagaacaattga
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