Populus trichocarpa (black cottonwood): 7485483
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Entry
7485483 CDS
T01077
Name
(RefSeq) isoamylase 1, chloroplastic isoform X1
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00500
Starch and sucrose metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
7485483
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
7485483
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Gene cluster
GFIT
Motif
Pfam:
ISOA1-3_C
Alpha-amylase
CBM_48
GHL10
Motif
Other DBs
NCBI-GeneID:
7485483
NCBI-ProteinID:
XP_006381137
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Position
6:5170509..5179429
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AA seq
845 aa
AA seq
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MFEIRYMTFCVPIKQTHTAYHHQNVPLLATHDHVPVISSNSSLFPLKLQNMNLVHSPSHS
LQLPKFISHFQNTPKFYPPKRVTTSNLETIGSNIFSNSTALIPIKAASEGVDTAVVVVEE
EEPKLKKIQVFEGHPAPFGATVRDGGVNFAIFSADAVSATLCLISLSDLPENRVTEQIFL
DPLTNKTGDVWHVLLKGDFKDMLYGYKFDGNFSPEVGLYYDPSKIVLDPYAKSVISRGEF
GVLGHDDNRWPQMACMIPTAENKFDWEGDSPLKHPQRDLIIYEMHVRGFTQHESSRTEFP
GTYLGVVEKLDHLKELGVNCIELMPCHEFNELEYYSYNSVLGDYKVNFWGYSTVNYFSPM
TRYSSAGTRNCGRDAINEFKLLVREAHKRGIEVFMDVVFNHTAEGNEKGPILSFRGVDNS
IYYMLAPKGEFYNYSGCGNTFNCNHPIVRQFILDCLRYWVTEMHVDGFRFDLASIMTRSS
SLWDAVNVFGSPIEGDLLTTGTPLSSPPLIDMMSNDPILRDVKLIAEAWDAGGLYQVGMF
PHWRIWSEWNGKYRDIVRQFVKGTDGFSGAFAECLCGSPNLYQEGGRKPWNSINFVCAHD
GFTLADLVTYNKKHNLANGEDNNDGENHNNSWNCGQEGEFASISVKKLRKRQMRNFFLCL
MVSQGVPMIYMGDEYGHTKGGNNNTYCHDNHINYFRWDKKEESSSDFFRFCRLMTKFRHE
CESLGLNDFPKAERLQWHGHDPGTPDWSETSRFVAFTLIDSVKGEIYIAFNASHLAVTIT
LPERPGYRWEPLVDSGKPAPFDFLSSDIPERDLAIKQYSHFLEANLYPMLSYTSIILVLS
PNDNA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagatcagatatatgacattctgtgtccccatcaaacaaacacacaccgcttac
catcaccaaaatgtaccacttcttgccactcatgatcatgtaccagtaattagcagcaac
agctctctattccccctcaaactacaaaacatgaacttagttcactctccttcacactca
ctacaactccccaaattcatttcccatttccaaaataccccaaaattctatcctccaaaa
agagttaccacttccaatttagaaacaattggcagtaacatttttagtaattcaacagca
ttgattcccattaaagcagcaagtgaaggagtggatacagctgtagtagtggtggaggag
gaggagcctaaattgaaaaaaattcaggtgtttgaaggccatcctgcaccatttggtgca
acagttcgtgatggtggtgtcaattttgctatattttctgccgacgcagtttctgctact
ctttgcttgatttcactctctgatttgcctgagaatagagtgactgagcagatttttctt
gatcctttgaccaacaagactggagatgtttggcatgtgcttttgaaaggagattttaaa
gatatgctatatgggtacaagtttgatgggaacttttctcctgaagtaggactttactat
gatccttctaagatcgtattggatccttatgcaaaatcagttattagcagaggggagttt
ggtgttttggggcatgatgataatcgatggcctcaaatggcctgcatgatacccactgca
gaaaacaagtttgattgggagggagattcaccattaaagcatccacaaagagatctaata
atatatgaaatgcatgttcgagggtttacacagcatgaatcaagcaggactgaattccct
ggtacataccttggtgtagtggagaagcttgatcatttgaaggaacttggtgtcaactgc
atagagttaatgccatgccatgaattcaatgagcttgagtactacagttacaattctgtc
ttgggtgactacaaggttaatttttggggatattctaccgtcaattacttttcgcctatg
acaagatactcatctgctggcacaaggaactgtggccgagatgcaattaatgaattcaag
cttcttgttagagaagcacataaacgaggaattgaggtgttcatggacgttgttttcaat
cacacagcggaaggaaatgagaaaggtcccattctgtctttcagaggagttgataacagt
atctattacatgcttgctcctaagggagagttctataattattcaggttgtggcaacaca
ttcaattgcaaccatcctatcgtgcgtcaatttatattggactgcttaagatattgggtg
acagagatgcacgtagatggcttccgctttgaccttgcttctattatgactagaagtagt
agtctctgggatgcagttaatgtattcgggagtcccatagaaggtgacttgctgacaact
ggcactcctctcagcagccctccattgattgacatgatgagtaatgatcccatactccgt
gatgttaagcttatagctgaagcatgggatgcgggaggattgtatcaagttgggatgttt
ccccattggcgtatttggtcagaatggaatgggaagtatcgagacattgtgcggcagttc
gttaaggggacagatggtttttctggggcttttgctgaatgcctctgtgggagcccgaat
ttataccaggaaggaggaaggaaaccatggaacagcatcaactttgtatgtgcacatgat
ggttttactttggctgatttagtgacatataacaagaagcataacttggcaaatggcgaa
gacaacaatgatggagaaaatcataacaatagctggaattgtggacaggagggtgaattt
gccagcatttcagtgaagaaattgcgaaaacgacaaatgagaaatttcttcctgtgtctc
atggtttcacaaggtgttccaatgatatacatgggtgatgaatatggtcacacaaaaggg
ggaaacaacaatacatattgccatgataaccatattaactacttccgctgggataagaag
gaagaatcctcatcagacttctttagattttgccgcctcatgaccaagttccgccatgaa
tgtgagtcccttggcttgaatgacttcccaaaagcagagaggctgcaatggcatggtcat
gatcctggaacaccagattggtcagaaacaagccgttttgtggcctttacactgattgac
tcggtgaagggcgagatctacatcgccttcaatgctagccatttggcagttaccattaca
ctgccagaacggccaggatacagatgggagcccctggtagactctggcaagcctgcaccg
tttgatttcctttctagtgacatcccagaaagagacctcgcaattaaacagtattctcac
ttccttgaggccaatctataccctatgcttagttatacttccatcatcctcgtactctct
cccaacgacaatgcttaa
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