Populus trichocarpa (black cottonwood): 7485516
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Entry
7485516 CDS
T01077
Name
(RefSeq) biotin carboxylase 1, chloroplastic
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00061
Fatty acid biosynthesis
pop00620
Pyruvate metabolism
pop00640
Propanoate metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
pop01212
Fatty acid metabolism
Module
pop_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
7485516
00640 Propanoate metabolism
7485516
09103 Lipid metabolism
00061 Fatty acid biosynthesis
7485516
Enzymes [BR:
pop01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
7485516
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
7485516
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Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_5
RimK
ATP-grasp_3
GARS_A
Motif
Other DBs
NCBI-GeneID:
7485516
NCBI-ProteinID:
XP_002308127
UniProt:
B9HBA8
A0A2K1ZYM6
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Position
6:5814153..5823589
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AA seq
528 aa
AA seq
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MEATLPVCKSVTSTPGLFMGKTSGIRSSQCSFMMGNKVNFPRQRAQTAHVHCAKNGGALG
VTCRAEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPSS
QSYLVIPNVLSAAISRRCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRVMGDKS
TARETMKKAGVPTVPGSDGLLQSTEEGVRLANEIGYPVMIKATAGGGGRGMRLAKEPDEF
VKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKFGNVVHFGERDCSIQRRNQK
LLEEAPSPALTPELRKAMGDAAVSAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVEH
PVTEMISSVDLIEEQIRVAMGEKLRYKQEDIVLRGHSIECRINAEDAFKGFRPGPGRITA
YLPSGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALDDTIITGVPT
TIDYHKLILEIEDFKNGNVDTAFIPKHEKELAAPQQIIPAKQLTNSAA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggaggctacgttgcctgtttgcaaatctgttacctctactcctggtttattcatgggg
aaaactagtggaatcaggagttctcaatgcagctttatgatgggaaataaggttaacttt
cctagacaaagagctcagactgcccacgttcactgtgctaagaatggaggagctcttggg
gttacatgtcgcgcggaaaaaattctggtagcaaacagaggagagattgctgttcgtgtt
attcgaactgcacatgagatggggataccatgtgtagctgtttactccaccatagataag
gatgcacttcatgtgaaattggctgacgaatcagtttgcatcggtgaagcacccagcagt
cagtcgtacttagtgatcccaaatgttttatctgctgctataagtcgtagatgtacaatg
ctgcatcctggatatggcttccttgctgaaaatgctgtatttgtggaaatgtgcagagaa
catggaataaactttattgggcctaatcctgacagtataagggtcatgggtgacaaatca
actgctagagaaacaatgaagaaggcaggggttccaactgtaccaggaagtgatggctta
ttacagagtactgaggaaggagtaaggctcgccaacgagattggttatcctgtgatgatc
aaggcaacggcaggtggtggaggacgtggaatgcggctcgccaaagaacctgatgagttt
gtaaagttgctacagcaagctaaaagtgaggctgctgctgcatttggaaatgatggagtt
tatttggagaagtatgttcaaaatcccagacacattgaattccaggttcttgcagacaaa
ttcggtaatgttgttcattttggtgagcgagactgcagtattcagagacgaaaccaaaag
ctgttggaagaagcaccatctccagctttgactcctgagttacggaaggccatgggtgat
gcagcagtttcagccgcagcatccatagggtacattggtgttggaacagttgagttcctt
ttggatgaaaggggttccttctacttcatggaaatgaacactcgaatccaggtggagcat
ccggtgactgaaatgatttcttctgttgatttgattgaggaacaaattcgtgtagccatg
ggagagaaacttcgatacaaacaggaagatattgttcttagaggacattcaattgaatgc
cgtatcaatgcagaagatgcttttaagggattccgacctgggcctgggagaataacagca
tatttgccatctggaggcccgtttgttagaatggatagccatgtttatcctgattatgtt
gttcctccaagctatgattccctacttggaaagcttattgtctgggctccaacaagagaa
aaggcaattgagcgaatgaaaagggctcttgatgacactattattactggagttccgacg
actatagattaccacaaacttatccttgaaattgaggacttcaaaaatggaaatgttgat
accgctttcattccgaagcatgaaaaggagttagcagcgccacaacaaatcataccagcc
aaacagttgaccaattcagccgcataa
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