Populus trichocarpa (black cottonwood): 7485522
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Entry
7485522 CDS
T01077
Name
(RefSeq) cycloartenol synthase
KO
K01853
cycloartenol synthase [EC:
5.4.99.8
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00100
Steroid biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00917
Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
7485522
Enzymes [BR:
pop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.8 cycloartenol synthase
7485522
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GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Pec_lyase
TED_complement
Motif
Other DBs
NCBI-GeneID:
7485522
NCBI-ProteinID:
XP_002308131
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Position
6:5898815..5907829
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AA seq
760 aa
AA seq
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MWRLKIAAGGNPWLRTNNDHIGRQIWEFDPKLTLSPEEISEIENARQNFTKNRFQSKHSA
DLIMRMQFEKENPVSEVLPQVKLKESEKVTEEAVTTTLKRGLDYYSSIQAHDGHWPGDYG
GPMFLMPGLVITLSITGALHAVLSDEHKKEIIRYLYNHQNRDGGWGLHIEGPSTMFGSVL
NYVTLRLLGEGPNDGEGAMEKARDWILNHGGATMITSWGKMWLSVLGVFEWSGNNPMPPE
MWLLPYLLPVHPGRMWCHCRMVYLPMSYLYGKRFVGPITPTILSLRKELFTVPYHEIEWN
QARTLCAKEDLYYPHPLVQDVLWALLDKAAEPVLMHWPGKKLREKALCTAIEHIHYEDEN
TRYLCIGPVNKVLNMLCCWVEDPNSEAFKLHIPRIQDYLWLAEDGMKMQGYNGSQLWDTA
FAVQAIISTNLVEEYSPTLKKAHAFVKNSQILEDCPGDLHFWYRHISKGAWPFSTADHGW
PISDCTAEGLKAALLLSKIPSEIVGEPLVANRFYDAVNVLLSLQNGDGGFATYELTRSYS
WLELINPAETFGDIVIDYPYVECTSAAIQALTSFKKLYPGHRSEEIESCIRKATMFIESI
QEKDGSWYGSWGVCFTYGIWFGIKGLVAAGKNFNNSSSIRKACDFLLSKQCSSGGWGESY
LSCQNKTYSNIEGNRAHVVNTAWAMLSLIEAGQAEREPEPLHRAARYLINSQMENGDFPQ
QEIMGVFNRNCMITYAAYRDIFPIWALGEYRCRVLQAKAS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggctaaagatagcagcaggaggaaatccatggctaagaacaaataatgatcat
attggaagacagatttgggaattcgatccgaaactaactctatctcccgaagagatctca
gagatcgaaaatgcgcgtcagaactttactaaaaatcggtttcaatccaagcatagtgca
gatctaatcatgcgcatgcagtttgagaaggagaatccggtgtcggaagtgttgccgcag
gtgaaattgaaggagagtgagaaagttacggaggaggcggttactacaacgttgaagaga
ggtttggattattattcgagtattcaagctcatgatggacactggcctggtgattatggt
ggtcctatgtttcttatgccaggattggtgattactttgtcaattactggagcactacat
gcagtgttatcagatgaacataaaaaggagataattcggtacctttacaatcatcagaac
agagatgggggatggggtttgcatattgagggaccgagtacgatgtttggttcggtgttg
aattatgttactttaaggttgcttggagaagggccgaatgatggagaaggtgcgatggag
aaagcacgtgattggattttgaatcatggtggtgcgactatgataacatcatgggggaaa
atgtggctttcagtacttggagtgtttgagtggtctggaaataatccaatgccccctgag
atgtggcttcttccttatttgctcccagttcatccaggaaggatgtggtgtcactgccgg
atggtctatctgcctatgtcctacttatatgggaagcggtttgttggcccaatcacacca
acaattttatctttgcgaaaggagctgttcactgtcccatatcatgaaatagaatggaat
caagcgcgcaccctatgtgcaaaggaggacttatattaccctcaccctctggtgcaagat
gtactttgggcattgcttgacaaggctgccgaacctgttctaatgcattggcctggaaag
aagttgagagaaaaggcactttgtactgcaattgagcacatacactatgaagatgaaaat
actcgttatctttgcataggacctgtaaataaggtgttaaatatgctttgttgttgggtg
gaagaccctaactcagaagctttcaagttgcatattcctagaatacaagattacctctgg
cttgctgaagatggaatgaaaatgcagggttacaatggaagtcaattgtgggacactgct
tttgccgttcaagcaattatttcaactaatcttgttgaggaatacagtccaactttaaaa
aaagcacatgcattcgttaaaaattcacagattttggaagattgccctggagatcttcat
ttctggtatcgccatatttccaaaggtgcatggcctttctcaactgcagatcatggatgg
cccatctcagattgcacagcagagggactaaaagctgctctcttattatcaaaaattcca
tctgagattgttggggaaccgttagttgcaaaccgattttatgatgcagtaaatgtcctc
ctctcattacagaatggggatggtggttttgcaacatatgagctcacgagatcttacagc
tggttagagttgatcaacccagctgaaacttttggtgacattgttattgattacccatat
gttgaatgtacttcagctgcaattcaagctttgacatcgtttaagaaattatatcctgga
caccggtcagaagaaatagaaagttgtatcagaaaggcgactatgttcattgaaagtatc
caggagaaggatggctcatggtatggctcatggggtgtttgcttcacctatggcatatgg
tttggcataaaagggctggtggctgctggaaaaaacttcaataatagctctagcattcgt
aaagcctgtgattttctgctgtccaaacagtgttcttctggtggttggggagagagttat
ctttcatgtcaaaacaagacatattcaaatattgaagggaacagagctcatgtggtaaat
acagcatgggctatgttgtctctcattgaagctgggcaggctgagagagagccagaacca
ttgcaccgtgcagcaagatatttgataaattcccagatggaaaatggagactttccgcag
caggaaatcatgggagttttcaataggaattgtatgataacatatgctgcctacagggac
attttccccatttgggcattgggagaataccggtgtcgggtgctgcaggccaaggcttca
tag
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