Populus trichocarpa (black cottonwood): 7485689
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Entry
7485689 CDS
T01077
Name
(RefSeq) pumilio homolog 2
KO
K17943
pumilio RNA-binding family
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
7485689
NCBI-ProteinID:
XP_002299859
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All DBs
Position
1:26108985..26116491
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AA seq
1065 aa
AA seq
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MLSELGRRPMIGANDGSFGDDLEKEIGLLLREQRRQEADDREKELNLYRSGSAPPTVEGS
LNAVGGLFGGGGNGGASFSDFIGGKNGNGFTSEKELRSDPAYLSYYYSNVNLNPRLPPPL
LSKEDWRSAQRLKGGSSVLGGIGDRRKGSRADSGNGRSMFSMPPGFESRNQDSEVESEKV
SGSLEWGGDGLIGLPGLGLASKQKSFAEIFQDDLGRATPVTGPPSRPASRNAFNENVETL
GSAEAELAHLRRELSSADTLRSGANGQGSSPVQNIGQPSYSYAAALGASLSRSTTPDPQH
VARAPSPCPTPIGQGRVSTSEKRGTASSNSFIGVSSGIREPSELVAAFSGINLATNGGVD
EESHLPSQAEQDVDSHQNYLFGLQGGQNHLKQNTYINKSESGHLHMSSVPQSANLSYSDL
ARSNGGGSNLNSPSLMADRQVELQKLAFPSGNSYMKGSPTSALGGGGGLPAQYQHLDGIN
SSLPNYGLSGYSMNPALASMIAQQLGTGNLPPLFENVAAASAMAIPGMDSRVLGSGLGSG
TNLTAASLESYNLGRGGSPIAGSALQAPFVDPMYLQYLRTPDYAATQLSAINDPSLDRNY
LGNSYLNFLEIQKAYGLLSSQKSQYGVPLGGKSGSSTHHGYFGNPAFGVGMPYPGSPLAS
PVIPNSPVGPASPLRHNELNMRFPSGMRNLAGGIMGHWPLDAGCNMDENYAPSLLEEFKS
NKTKCLELSEIVGHVVEFSADQYGSRFIQQKLETATMDEKNVVYEEIMPQALPLMTDVFG
NYVIQKFFEHGLPSQRRELAGNLFGHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVEELD
GHVMRCVRDQNGNHVIQKCIECIPEDNIQFIVSTFFDQVVNLSTHPYGCRVIQRILEHCK
DAKTESKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGKIVQMSQQKF
ASNVVEKCLTFSGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRE
LILTRIKVHLNALKKYTYGKHIVARVEKLVAAGERRSAAQSLHPA
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgctatctgaattgggaaggagaccgatgataggagctaatgatggatcattcggtgat
gatttagagaaggagatagggttattgttgcgtgagcaacgtaggcaagaagctgatgat
cgtgagaaagagctcaatttgtataggagtggttctgctcctccaaccgtggagggttca
ttgaatgcagtcgggggcttgtttggcggcggaggtaacggtggtgcctctttctcagac
tttattggtggaaaaaatgggaatggtttcacgtccgagaaggagcttaggtctgatcca
gcttacttatcttattactattcaaatgtgaatttgaaccctaggcttcctcctcctttg
ctgtcgaaggaggattggaggtctgcgcagagattgaagggtggaagttcagtcttaggt
gggattggagataggaggaaaggtagtagagctgatagtggtaatggtagatcaatgttt
tcaatgccgccagggtttgaatcgaggaatcaagacagcgaggttgagtcagagaaggtt
tctggctcacttgaatggggtggtgacgggctgattggtttaccaggattaggacttgcc
agcaaacagaagagctttgctgaaatatttcaggatgatttggggcgtgcaactcctgtg
acagggcccccatctcgcccggctagtcgtaatgcatttaatgaaaacgttgagacctta
ggttcagctgaagcggagttggctcatttgcgccgtgaattatcatctgcagatacttta
cgatctggtgcaaatggccagggctcctctcctgtccaaaatataggccaaccttcttat
agttatgccgctgctcttggtgcctccttgtctaggagtactactcctgatcctcaacac
gttgccagggcccctagtccatgtcctacacccattggacaagggagagtgagtacatct
gaaaagagaggcactgctagttcaaactcattcattggtgtctcatctggtatcagggag
ccttcagagttggtagctgcgttttctggcattaacttggcaacaaatggtggagttgat
gaagaaagccatttgccatcacaggctgaacaggatgttgacagccatcagaattatctc
tttggcctccaaggcggccagaatcatctgaagcaaaatacatacataaacaagtctgaa
tctgggcatttacatatgtcttctgttcctcaatctgccaatttatcatattctgatttg
gctaggagtaatggtggtggatcgaacctcaacagcccatccttgatggctgacaggcag
gttgaactacaaaaattggcttttccttctggcaattcttacatgaaaggatcacctacc
tcggctcttggtggtggaggtggcttacctgcacagtatcagcatctagatggtatcaat
tcatcacttccaaactatggactgagtgggtattccatgaatccagcattggcttccatg
attgcccagcagcttggcactggtaatctgccaccattatttgaaaatgttgctgccgca
tctgctatggccatccctggaatggactcaagagtgctcggaagtggtttggggtctgga
acaaatctaactgctgcttcgttggagtcttataatcttgggagaggggggagtccaata
gcaggtagtgctcttcaggcaccttttgttgatcctatgtatctccagtacttgaggact
cctgactatgctgctacccagctctctgctattaatgatccctcactagataggaactac
ttgggtaattcatacttgaatttccttgaaattcaaaaggcttatggtcttctatcatct
cagaaatcacagtatggtgtcccattaggtggtaaatctggcagttctactcatcatggt
tattttgggaatcctgcctttggtgttggtatgccatatcctggaagtcccctggcaagc
cctgtcattccaaactccccagttggacctgccagtcccttaagacacaatgaactgaat
atgcgttttccttctggaatgaggaacttagctgggggcatcatgggacactggcccttg
gatgcaggatgtaacatggatgaaaactatgcgccatccctattggaagagttcaagagc
aataaaaccaagtgtcttgaactctcagaaattgttggtcatgttgttgagttcagtgcg
gatcagtatgggagccgattcattcaacaaaaacttgagactgccacaatggatgagaaa
aatgtggtttatgaggaaatcatgccccaggctcttcctctgatgactgatgtgtttggt
aattatgtaattcagaagtttttcgagcatggccttccatcacagagaagagaattggct
ggcaatctttttggtcatgttttgacacttagtcttcaaatgtatggctgtcgagtgatc
cagaaggccattgaggttgttgacctagaccagaaaataaaaatggttgaagagctcgat
ggtcatgtaatgcggtgtgtacgtgaccagaatgggaaccatgtcatccaaaagtgcatc
gagtgtattcctgaagataacattcagtttattgtctcaacattctttgatcaagttgtg
aatctctccacccatccatatgggtgtcgtgtgatacagaggatattggaacactgcaag
gacgcaaaaacagagagtaaagttatggatgagattttaggtgctgttagtatgttggcg
caagatcaatatggaaattatgtagtgcagcatgtgctggaacatggaaaatctcatgaa
cgatctgctattatcaaggagttagctgggaagattgttcagatgagtcagcagaagttt
gcctccaatgttgtggagaagtgtttaacttttagtggtcctgctgaacgccaaatactg
gtcaatgagatgcttggcactactgatgaaaatgagcctcttcaggcaatgatgaaggat
cagtttgccaactatgttgtgcaaaaagtgctggagacatgtgatgaccaacagcgtgag
ctgatccttacaagaataaaagtccatttaaatgcactgaagaagtacacctatggaaag
catattgttgcacgtgtagagaaacttgttgctgctggggaaaggagaagtgctgcacag
tccctgcaccctgcttag
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