Populus trichocarpa (black cottonwood): 7485697
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Entry
7485697 CDS
T01077
Name
(RefSeq) scarecrow-like protein 33
KO
K27753
GRAS family protein LISCL
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7485697
Transcription factors [BR:
pop03000
]
Eukaryotic type
Other transcription factors
GRAS
7485697
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Gene cluster
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
7485697
NCBI-ProteinID:
XP_024467558
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Position
1:25933957..25937574
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AA seq
795 aa
AA seq
DB search
MDQNYTGLHDRFQNDSKFDETIMLPNSEQYPNIEHGLEFNIPSPDLSFMNLPFDPPDTDP
DRFGLSFNSSPGVESFVPSMSLSPDGEALDPSSAWSPEAEASSPSEDSDSSDPLLKYISQ
MLMEENMEDQPHMFHDHFALSTTEKSLYDVLGEQYPSSLDSPESYVNLESPDSIFLASGS
NCGDNTSKSTSTGTTSGTIDSAKETQWVGGDVGGMNPSFSRTPLPDDNHLHSNFQPNVQF
TGNPSNGFTDTGDGLMGSSAGEMVQNMFSDAESVLQFKRGLEEASKFLPIASQLVIDLET
NAVSSRQKEDAPIVVVKEENSERDSSPDGSRGRKNHEREDPDLEEGRRNKQSAVHVEESE
LSEMFDKVLLWTGGQCCGDDAVQDVASKNSQPDEQSNGSSGGKTRAKRQNKKKETVDLRT
LLILCAQAVSANDFRTANELLKQIRQHSSQFGDGTQRLAHFFANGLEARLAGSGDGTRSF
FTHLASKRTTAADMLKAYKTNLQACPFKKFSIFFAISMILQAAEKASTLHIVDFGVLYGF
QWPILIQQLSLLPNGPPKLRLTGIELPQHGFRPSERIEETGRRLAKYCERFKVPFEYNPI
AAQNWERIPIEDLKINRNEVLAVHCQCRFKNLFDETVEVDCPKNAILNLIRKMNPDIFVH
TIINGSYNAPFFLTRFREALFHFSSLFDMFDSTLPREDQARIMFEGELYGRDAMNVVACE
GQERVERPETYKQWQARTVRAGFKTLPLEQKLMTKFRGKLKTYYHKDFVIDEDNDWMLQG
WKGRIIYASSCWVPA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaattacacaggactccatgatcgtttccaaaatgattccaaatttgatgaa
acgatcatgctcccaaattcagaacaatacccaaatatcgagcacggacttgaattcaat
atcccttctcctgatcttagcttcatgaatcttcctttcgacccccctgatacagatcct
gatcgttttggtctatcctttaactcgagtccaggggtagagtcatttgtcccctcgatg
agcttgagcccggatggagaggcccttgatccctcatcggcttggagtcccgaggcagaa
gcctcctctccttctgaggatagtgattcctctgacccgcttctcaagtacataagccag
atgcttatggaagagaacatggaggatcagccacacatgtttcatgatcacttcgctcta
agcaccactgagaagtcattgtatgatgtactaggtgagcagtatccttcctcactcgat
tcgcccgagtcttatgtcaaccttgagagccctgacagtatttttttggcaagtggaagt
aattgtggtgataataccagcaagagcacaagcacaggcactaccagtggtactattgat
tctgctaaagaaactcagtgggttggtggtgatgtgggagggatgaatccatctttttct
agaacccctcttcccgatgataaccatctccattccaattttcagcccaatgtgcaattt
acagggaatccgtcaaatggtttcactgacacaggggatggccttatgggttcttctgca
ggtgagatggtgcagaatatgtttagcgatgcggaatctgtgttgcagttcaagagaggg
ttagaggaagcaagcaagttccttcctattgccagtcaactggtaattgatttggagaca
aatgcagtttcctcaaggcaaaaggaagatgctcctatagtggtggtgaaggaggagaat
tctgagagggatagctcgcctgatgggtcgaggggtaggaagaatcatgagcgagaggat
ccagatttagaagaaggaaggcgtaataagcagtctgcggtgcatgtggaagagagtgag
ctatcggagatgtttgataaggtattgctttggactgggggacaatgctgtggcgatgat
gctgttcaggatgtagcaagcaagaactcgcagccagatgaacaatcaaatggatccagt
ggtgggaaaacccgtgctaaaaggcagaacaaaaagaaggaaaccgtggatctgaggact
ctcctgatcctctgtgcacaagctgtctctgccaatgatttcaggactgctaatgagcta
ctgaaacagattaggcagcactcttcacaatttggtgatgggacacagaggttggctcat
ttcttcgccaatggtcttgaggcacgcttggctggcagtggcgacggaacccgaagtttt
ttcacccatcttgcttcaaagaggacaacagctgctgatatgctgaaagcttacaaaacc
aatcttcaagcctgcccctttaagaaattttcaattttctttgcaatcagcatgattttg
caagctgctgagaaagcaagtactctccatatagtagattttggtgtcctctatggtttt
caatggccaattcttatccagcaactctctctcctccctaatggccctccaaagctacgc
cttacaggaatagagctgccccaacatggtttcaggccgtcagaaagaattgaggagaca
ggacgtcgcttggcaaagtattgtgagcgctttaaggttccatttgaatacaatcccatt
gccgcacaaaactgggaaagaatcccaattgaggacctcaagattaatagaaatgaggtg
cttgctgtgcattgtcaatgtcggtttaagaatctatttgatgagacagttgaagtggac
tgcccaaagaatgctattcttaacttaattcggaagatgaatcctgatatttttgttcat
actattattaatggatcatacaatgctcccttcttcctcacacggtttcgggaggcacta
ttccacttctcctcactattcgacatgtttgattctactttaccacgggaagatcaagcg
aggataatgtttgagggagaactttatggccgggatgcaatgaatgtggtagcatgtgag
ggtcaagaaagggtcgagaggcctgagacatacaagcaatggcaggcccggactgtgagg
gcagggttcaagactctaccattggaacagaagctcatgacaaagtttaggggtaagttg
aagacctattaccacaaggattttgtaattgatgaagacaacgactggatgctgcagggt
tggaagggtcgaattatttatgcttcctcttgttgggtgcctgcatag
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