Populus trichocarpa (black cottonwood): 7485711
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Entry
7485711 CDS
T01077
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
7485711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7485711
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7485711
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
U-box type E3
7485711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
U-box
HEAT_2
MLKL_N
Arm_2
Neurochondrin
zf-RING_UBOX
HEAT_EZ
zf-C3HC4_4
zf-Nse
KAP
zf-C3HC4_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
7485711
NCBI-ProteinID:
XP_002298363
LinkDB
All DBs
Position
1:complement(25630426..25634879)
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AA seq
663 aa
AA seq
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MEEEENGGGEVVDILIETVNKIASISDYRCTVKKQYCNLARRLKLLIPMLEEIRDSKDSI
IPQQTLKALVLLKQALDSAKDLLIFGCEGSKIYLVLEREQIMNKYHEVTAKLEQALSGIS
YEGLDISDEVKEQVELVLAQFRRAKGRVDATDVELYEDLLSLYNKTNDSASDLAVIRRIS
EKLQLMGIVDLTQESLALHEMVAATGGDPGESIEKMSMLLKKIKDFVQTENPNLDAPERE
KNLPPSGSGLVDGSHQMPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLGAGHDT
CPKTQQKLTSTAPTPNYVLRSLIAQWCEANGIEPPKRPSSSGTSKTVSTCSLAERTKIEI
LLHKLTSGCLEDQRSAAGEIRLLAKHNADNRVAIAQAGAIPLLVGLLSTPDPRIQEHAIT
ALLNLSICEDNKGSIVSAGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKVTIGFLG
AIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMCLLTETGGGMVDE
ALAILAILASHPEGKATIGAAEAVPVLVEVIRNGSPRNRENAAAVLVHLCSGDQKHMVEA
QEHGVMGPLVDLAQNGTDRGKRKAQQLLERISRFVEQQNHSQAQTEAHIQQPQPSSMANF
GDS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagagaatggaggaggtgaggtagtagatattttgattgagacagtgaac
aagattgcttcgatctcagattacagatgtacggtcaagaaacagtattgcaatctagcc
aggaggttgaagttgttgataccaatgttggaagagattagagacagcaaagactccatc
atccctcaacaaactctcaaagctcttgttttgctcaaacaagctttggattccgctaaa
gatttgcttatatttggttgcgaaggaagcaagatttacttggtcctagagagggaacaa
attatgaataaataccatgaggtgacagctaaattggagcaagctctaagtggaatttcc
tatgaaggcctggacatatctgatgaagttaaggaacaggttgagcttgtccttgctcaa
tttagaagagccaaaggaagggtcgatgctaccgatgttgagctgtatgaagatctcttg
tccctttacaacaagaccaatgattcagcatcagatcttgctgtcataagaagaatatct
gaaaaattacaattgatgggaatagttgaccttacacaagagtctctagctttgcatgag
atggttgctgctactggaggagatcctggggagagcattgagaagatgtcgatgcttttg
aagaaaattaaagattttgtgcaaacagaaaacccaaacctggatgcacctgaaagagaa
aagaatcttcccccaagtggcagtggacttgttgatggaagtcaccagatgccagttata
ccagatgatttccgctgtccaatatccctggaattgatgaaggatcctgtaattgtttca
acagggcagacctatgaacgttcctgcattgagaaatggctgggagcaggacatgacact
tgtccaaagacgcaacagaaactcactagtactgctccgacacccaactacgttctacga
agcctcatagcgcagtggtgtgaagccaatggcattgagccaccaaaaaggcccagcagt
tctgggacaagtaaaactgtatctacttgctcacttgctgagcgtacaaagattgaaatt
ctcctccacaagcttacatctggctgcctagaagaccagcggtctgctgctggggagatc
cgtcttcttgccaagcacaacgctgataatcgtgtggctattgctcaagctggtgcaatc
cctctccttgttggcctcctctctacacctgaccctcgcatccaagagcatgcaattaca
gcacttcttaacctctccatatgcgaagataacaaaggaagcattgtatcagctggggca
gttcctggtattgtgcatgtgctcaagaagggcagcatggaagctcgagaaaatgctgca
gccacccttttcagcctttcagttgtggatgaaaataaggttacaattggttttctgggg
gctatcccacctctggtgacacttctaagtgaaggtacacaaagggggaagaaggatgca
gcgactgcacttttcaacttgtgcatctaccaggggaacaagggaaaggcagtgagggcc
ggagttgtgcccacattgatgtgtctattaacagaaaccggaggtggaatggtggatgag
gcactggctatactagcaatactggctagccaccctgaagggaaggcaaccattggagct
gcagaggcagtgccagttttggtggaagttatcaggaatgggtcacccaggaacagagag
aatgcagcagcagtgttggtgcatctttgttctggagaccagaaacatatggtagaggca
caagaacatggagttatgggaccgctggtggatttggcacaaaatggcacagaccgggga
aagaggaaggctcaacagttgcttgagcgtataagcagatttgttgagcaacaaaatcac
tctcaggcacaaactgaggctcatatccagcagcctcagccatcctccatggctaatttt
ggtgatagctga
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integrated database retrieval system
