Populus trichocarpa (black cottonwood): 7485871
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Entry
7485871 CDS
T01077
Name
(RefSeq) autophagy-related protein 8i
KO
K08341
GABA(A) receptor-associated protein
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
7485871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7485871
04121 Ubiquitin system [BR:
pop04121
]
7485871
03029 Mitochondrial biogenesis [BR:
pop03029
]
7485871
Membrane trafficking [BR:
pop04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
7485871
Ubiquitin system [BR:
pop04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
7485871
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
7485871
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
7485871
NCBI-ProteinID:
XP_002316073
UniProt:
B9HXH0
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Position
10:complement(16271403..16273442)
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AA seq
118 aa
AA seq
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MGKATSFKNEFTFDERLGESKNIIVKYPDRVPVIIERYSRTDLPEMEKRKFLVPRDMTIG
QFIHILSSRLELTPGKALFVFVKNTLPQTASQMDSIYESYKDDDGFLYMCYSSEKTFG
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggccacgtctttcaagaatgaattcacatttgatgagagacttggagaatcg
aagaatattattgtcaagtacccagatcgagttcctgtgattattgaaagatattcaagg
acggacctgccggaaatggaaaagagaaaattcctggttccccgagacatgaccatcggg
caattcatccacattttaagtagtaggctagagttgactcctggaaaggctctgttcgta
tttgtgaagaacacattgcctcaaacagcaagtcaaatggattcaatctatgaatcttac
aaggatgatgatggatttctgtatatgtgctacagcagcgagaaaacatttggctaa
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