Populus trichocarpa (black cottonwood): 7485873
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Entry
7485873 CDS
T01077
Name
(RefSeq) pleiotropic drug resistance protein 3
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
7485873
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7485873
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
7485873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC2_membrane_3
RsgA_GTPase
AAA_30
AAA_29
AAA_18
AAA_22
AAA_25
AAA
AAA_28
AAA_16
Rad17
AAA_23
PduV-EutP
AAA_33
nSTAND3
ORC-CDC6-like
ABC_trans_N
NACHT
Viral_helicase1
AAA_5
AAA_19
AAA_17
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
7485873
NCBI-ProteinID:
XP_024465957
LinkDB
All DBs
Position
10:complement(16304819..16314085)
Genome browser
AA seq
1455 aa
AA seq
DB search
MAQVAYSDETESKKIDSAELGGSIRTSFRSHEPSFHSLSIGNANHRRNENEEDASQCLAT
IERLPSFERISTALSEEKDGTNGKGDAMGGKVVNVAKLRAQEGHVFNEKLIKHVENDNLR
LLQKLRKRIDIAGIQLPTVEVKYRNVCVEADCEVVRGKPLPTLWSTAKSILSGFANLSRS
KQRTKISIIKDVSGIIKPGRMTLLLGPPGCGKTTLLKALSGKPSNSLKVAGEISYNGHRL
EEFVPQKTAAYVSQYDLHIPEMTVRETVDFSARCQGTGSQAEILMEISRKEKQAGILQDT
DLDTYMKGISEEGAKITLQTDYVLEILGLDICADTMVGDTMRRGISGGQKKRLSTGEMVV
GPMKALFMDEISNGLDSSTTFQIVSCMQHLAHITDATVLISLLQPAPEIFDLFDDIMLMA
EGMVVYHGPRSSVCRFFEDSGFRCPERKEVADFLQEVISRKDQRQYWYCTEQPHSYVSVE
QFVKKFKESQLGQMLDEEIMKPFDKSNSHKTALCFRKYSLSKWELFKVCSTREFVLMKRN
SFIYVFKCTQLVITASITMTVFLRTRMAVDAIHASYYMSALFFALTILFSDGIPELHMTV
SRLAVFYKQRELCFYPAWAYVVPTAILKVPLSLVEAFVWTTLTYYVVGYSPEFGRFFRQF
LLLFLVHSTSISMFRFVASLFQTMVASVTAGGLALLITLLFGGFLIPKPSMPVWLGWGFW
ISPLAYGEIGLSLNEFLTPRWAKTVSGNTTIQQQTLESRGLNFHGYFYWISVGALIGLTV
LFNVGFALALTFLKSPGNSRAIISYERYYQQQGKLDDGASFDINNDKKTLTCACPKSSPG
DKKGRMALPFEPLTMTFKDVRYYVDTPLEMRKRGFPQKKLQLLSDITGAFRPGILTALMG
VSGAGKTTLMDVLSGRKTGGTIEGEIRIGGYPKVQHSFARVSGYCEQTDIHSPQITVEES
VIYSAWLRLPPEIDTKTKYEFVNQVLETIELDEIKDSLVGIPGISGLSIEQRKRLTVAVE
LVANPSIIFMDEPTSGLDARAAAIVMRVVKNIVETGRTIVCTIHQPSIDIFEAFDELILM
KIGGRIIYSGPLGQRSSKVIEYFENIPGVPKIKNRYNPATWMLEVSSKTAEADLGVDFGE
AYEGSTLYEENKELVKQLSSPTPGSKDLHFPTCFPQNGWEQLKACLWKQHLSYWRSPSYN
LLRIVFMSFGALLFGLLFWQQGNKINNQQDLFSIAGSMYSIIIFFGINNCSPVLAFVARE
RTVFYRERFAGMYSSWAYSFAQVLVEVPYLLIEGILYVIITYPMIGYSLSAYKIFWSFYS
MFCMLLFFNYLGMLLVSLTPNIQVASNLAAFAYTTLNFFSGFIVPKPYIPKWWVWLYYIC
PSSWTLNAMLTSQYGDVNKEISVFGETMTVADFVGDYFGFHHNFLGVVGVVLIIFPIITA
SLFAYFFGRLNFQRR
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggtggcatactctgatgagacagagtcaaagaagattgactcagcagagctt
ggaggaagcataagaacctcattcagaagtcacgagcctagttttcatagcctttcaatt
gggaatgccaaccatcgtagaaatgaaaatgaagaagacgcatcacaatgcttggctact
attgagagattaccttcttttgaacggatttctactgctttatcggaggagaaagatggc
acaaatggaaaaggagatgcaatggggggaaaagttgttaatgttgccaaacttcgagct
caagaagggcatgtgttcaatgaaaagctgatcaagcacgttgaaaatgataatctccga
ttgttgcagaagcttaggaaaagaattgacatcgctggtatacaattgcccaccgtagaa
gtgaaatacagaaatgtttgtgttgaagcagactgcgaggtagttcgtggcaaacctctt
cccactctgtggagcactgctaagagcattctctctgggtttgccaatctgtcacgttcg
aaacaaagaacaaagataagcatcataaaagatgtcagcggcatcattaagccaggaagg
atgactttactgcttggccctccaggttgtggcaaaaccactctgttgaaggctctctct
gggaaacctagcaattctctcaaggttgcaggggaaatatcttacaatggtcacagattg
gaagagtttgttcctcagaaaaccgcagcttatgtaagccaatatgatttgcatatacca
gagatgacagtgagggagacggttgatttttcagcacgctgtcagggcacaggaagccaa
gctgagatcttgatggaaatcagtagaaaggagaagcaggcagggattctccaagatact
gatttggatacatacatgaagggaatatcagaagaaggagcgaaaattacccttcaaaca
gactacgttttggagattctaggacttgatatttgtgccgacacaatggtcggggatact
atgagaagaggtatctcaggtggacagaagaaaagactaagtacaggagaaatggttgtg
ggtccaatgaaagccctattcatggatgaaatatcaaatggcttagacagttcgaccact
ttccagattgtgtcttgtatgcagcatttggcacatattaccgatgccactgtgttgatt
tcacttcttcagccagcaccagagatctttgacctctttgatgacatcatgttgatggca
gaaggaatggttgtttatcatggcccacgttctagtgtttgcagattcttcgaggactct
gggtttaggtgccctgagagaaaagaagttgcagacttccttcaagaggttatctctaga
aaagatcaaaggcagtattggtactgcacagaacaacctcacagttatgtttctgtagaa
cagtttgttaagaaattcaaagaaagccagcttggtcagatgctagatgaggagatcatg
aagccatttgataagtctaatagccacaagactgctttatgcttcagaaaatactcatta
tcaaaatgggaactgttcaaagtttgtagtacgagagaatttgttctcatgaagaggaat
tctttcatttatgtttttaaatgtacacagctagtgatcactgcttcaataacaatgact
gtcttcctgcgcacaaggatggctgttgatgcgatccatgcaagttattacatgagcgct
ttattctttgcattgactatattattttctgatggaatcccagagttgcatatgactgta
tcccgacttgcagttttttataagcagagagagttatgcttttaccctgcttgggcttat
gttgttcccacagctatccttaaagttccactttctctcgtggaagcatttgtttggaca
actcttacttattatgttgttggttacagcccagagtttggaaggttcttccgccagttc
cttctactctttctggtacattcaacatcaatatccatgtttcgctttgtcgcctccctc
ttccaaactatggttgcttcagtgacagctggaggactcgctttattgattactttacta
tttggtggctttttaatcccaaagccctctatgcctgtgtggttgggatggggattttgg
atttctccgttggcgtatggtgaaataggcttaagtctgaatgagtttcttactcctagg
tgggcaaagaccgtgtcaggtaacacaaccatacaacagcaaactctggaaagccgtgga
ttgaactttcacggttatttttactggatatcagttggagctttaattgggttgacagtg
ctcttcaacgttggctttgctttggctttaaccttcttgaaatccccaggaaactctcga
gctattatttcttatgaaagatactatcaacagcaaggaaaactagatgatggtgcttct
tttgacataaacaacgacaagaagaccctcacctgtgcatgtcctaaatctagtccagga
gataaaaagggaaggatggctttaccttttgagccccttactatgacatttaaggatgtg
cggtactatgttgatactcctttggaaatgagaaaacgtggttttccacagaagaagctc
cagcttctttcagacattactggtgcattcagacctggtattcttacagcattaatgggt
gttagtggagccgggaaaacaactcttatggatgttctttccgggaggaaaactggaggc
actattgaaggagagattagaattggtgggtacccaaaggttcagcattcattcgctaga
gtatcaggttactgcgaacaaacagacatacattccccccagattactgtagaagaatct
gtgatatattctgcttggttgcggcttcctcctgaaattgatacgaaaactaaatatgaa
tttgtaaatcaagtccttgaaactatcgagcttgatgaaatcaaagattctttagtaggc
attcccggaattagtggtttatcaattgaacagcgtaaacgactgacagtagctgtggaa
cttgttgccaatccatccatcatattcatggatgaaccgacttcaggtttggatgcaaga
gcagctgcgattgtcatgagagtagtgaagaacatagttgaaacaggaagaacaattgtt
tgcaccatccaccagccaagtatagatatcttcgaggcatttgatgagttgattcttatg
aaaattggtggacgcataatatattctggaccactgggtcagcggtcaagcaaggtcatt
gagtattttgagaatattcctggagtgcctaagattaagaacagatacaatccagcaaca
tggatgttagaggtttcttctaaaactgcagaggctgatcttggtgttgattttggtgaa
gcttatgaagggtccaccctatatgaggagaacaaagagttggttaagcaattgagctca
ccaactcctggctcaaaagacttgcattttcctacctgttttccgcagaatggctgggag
caactcaaagcatgcttgtggaaacagcacttgtcttattggcgaagtccttcgtataat
cttttgcgcattgtctttatgtcctttggagctctcctatttggcctactgttctggcag
caaggaaataaaataaacaaccagcaagacttgttcagtatcgctggctcgatgtactct
ataataatatttttcggcataaacaattgttctccagtcctagcatttgttgcaagagag
cggactgttttctaccgtgaaagatttgcaggaatgtactcttcatgggcctattcattt
gcacaggtgctggttgaggttccatacttgctcattgaagggattctttatgtgatcatc
acatatcctatgattggctactccttgtctgcctataagatattctggtctttctatagc
atgttttgtatgctgctgtttttcaactacctaggaatgctgctcgtatcattgacacca
aacattcaagtcgcctccaatttagctgcgtttgcgtacacaacgctgaatttcttctcg
gggtttatcgtgccgaaaccatacatcccaaagtggtgggtttggttgtattatatatgc
ccctcatcttggacattaaatgctatgctcacctcgcagtatggagatgtgaacaaagaa
atatcagtgtttggagagacgatgactgttgctgattttgtaggtgattactttgggttt
caccacaactttttgggtgttgtcggtgttgtgctaatcatctttcccattattaccgca
tctctttttgcttatttctttggaagactgaacttccagagaaggtag
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integrated database retrieval system
