Populus trichocarpa (black cottonwood): 7485946
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Entry
7485946 CDS
T01077
Name
(RefSeq) phosphoenolpyruvate carboxylase 4
KO
K01595
phosphoenolpyruvate carboxylase [EC:
4.1.1.31
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00620
Pyruvate metabolism
pop00710
Carbon fixation by Calvin cycle
pop01100
Metabolic pathways
pop01200
Carbon metabolism
Module
pop_M00168
CAM (Crassulacean acid metabolism), dark
pop_M00170
C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type
pop_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
pop_M00172
C4-dicarboxylic acid cycle, NADP - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
7485946
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
7485946
Enzymes [BR:
pop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.31 phosphoenolpyruvate carboxylase
7485946
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Gene cluster
GFIT
Motif
Pfam:
PEPcase
PEPcase_2
Motif
Other DBs
NCBI-GeneID:
7485946
NCBI-ProteinID:
XP_024462557
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All DBs
Position
8:complement(7261856..7273224)
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AA seq
1062 aa
AA seq
DB search
MTDTTDDIAEEISFQGFDDYCKLLKNLLNDVLQREVGTDFVEKLERNRTLAQSACNLRLA
GIEDTAELLEKQLASEISKMTLEEALTLARAFSHYLNLMGIAETHHRVRKTRDLAHLSKS
CDEVFNQLLQGGTSADELYDSVCKQEVEIVLTAHPTQINRRTLQYKHVRIAHLLDYNDRP
DLTQEDREMLIEDLVREITSIWQTDELRRHKPTPADEARSGLHIVEQSLWKAVPHYLRRV
STALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTRDVSLLSRWMAIDLYIREAD
SLRFELSMSRCSDKLSREAHDILEQETSPEDRHEGWNQLMSRNQTKHHGQQTPSLPTQLP
ATADLPSCTECGNNGGSQYPKLQLPGTDYLPLNCQDVQDSSNSESSFQDSSHGCCKSITN
GSTANSDSHQSAPSPRGSFTSSQLLAQRKLLAESKIVRSSFQKLLEPSLPQRPGIAPYRI
VLGHVKDKLTKTRRRLELLLEDLPCEYEPWDYYETTDQLLEPLLLCYESLQSCGAGVLAD
GRLADLIRRVATFGMVLMKLDLRQESGRHSEALDAITKYLDMGTYSEWDEEKKLEFLTRE
LKSKRPLVPSTIQVTPDVKEVLDTFRVAAELGSDSLGAYVISMASNASDVLAVELLQKDA
RLAVSGELGKPCPGGTLRVVPLFETVKDLRGAGLVIRKLLSIDWYSEHIIKNHSGHQEVM
VGYSDSGKDAGRFTAAWELYKAQEDVVAACKDNQIKVTLFHGRGGSIGRGGGPTYLAIQS
QPPGSVMGTLRSTEQGEMVQAKFGLPHTAVRQLEIYTTAVLLATLKPPERPREEKWRNLM
DEISKISCQSYRSTVYENPEFLAYFHEATPQAELGFLNIGSRPTRRKSSTGIGHLRAIPW
VFAWTQTRFVLPAWLGVGAGLKGVCEKGHTQDLKAMYKEWPFFQSTIDLIEMVLGKADVP
IAKHYDEVLVSDKSRRELGAALRRELLTTEKFVLVVSGHERLSENNRSLRRLIESRLPYL
NPINMLQVEILKRLRSDDDNHKLRDALLITINGIAAGMRNTG
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgacggacacaacagatgatatagcagaggaaatctcctttcaaggctttgatgattac
tgcaaactgcttaagaatttattaaacgatgtgttgcagagagaagttggtactgatttc
gtcgagaaacttgaacgcaatcgcactctcgctcagagtgcttgtaatttgagattggcg
gggatagaagacacagctgagttgctggagaagcagctggcatcagagatatcaaagatg
acattagaggaagcattgacacttgctcgtgctttcagccattatcttaatttgatggga
attgctgagacccatcacagggtacgtaagacacgggatttggcgcatctatcaaaatct
tgtgatgaagtctttaatcagctgttgcagggtggaacatcggctgacgaactttatgac
tctgtttgcaagcaggaggttgaaatcgttcttactgcacatcctactcaaattaatcgt
cgtaccttgcaatataagcacgttagaattgctcatcttttagattacaacgatcgacct
gatcttacacaggaagatagagaaatgcttatcgaagatctggtaagagagattacttca
atatggcagacagacgagcttaggcgccacaaacccacgccagcagatgaagccaggtct
ggcttgcacattgtggagcagtctctatggaaagcagtacctcattatttacgtcgtgtc
agcactgcgctgaagaagcatacaggaaagccacttccattaacctgcacgccaataaag
tttgggtcttggatggggggtgatagagatggaaatccaaatgtaacagcaaaggtcaca
cgagatgtctctcttttatcaaggtggatggctattgacctttacattagagaagctgat
agtctcagatttgaactatccatgtctcgctgcagtgataagttgtcaagagaggcacat
gacattctagaacaagaaacttctccagaggatcggcatgagggttggaatcaactgatg
agcagaaaccaaacaaagcatcatggccaacaaactccatcacttcctacgcaacttcca
gctacagctgatcttccctcctgcactgaatgtggcaataatggtggatcacagtatccc
aaactacaacttccagggactgattacttgccgttgaattgtcaggatgttcaggattct
tcaaactcagaatcttcattccaagattctagccatggctgttgcaaatcaattacaaat
ggaagtactgctaattctgacagccatcaatcagctccaagcccacgaggatctttcacc
tccagtcaactccttgctcagagaaaacttctcgcggaatctaagatagtaagatccagc
ttccagaagcttctagagccaagtctgcctcaacgtcctggaatcgctccttatagaatt
gttcttggtcatgtgaaagataagcttacgaagactagaagacggctggaacttcttctc
gaggatcttccctgtgaatatgagccttgggattactatgagacaacagaccaattgtta
gaaccactgcttctatgctacgagtctctgcaatcttgtggagctggggtgctagcagat
ggcaggctggctgacctgataagaagagttgcgacttttggaatggtattaatgaagctt
gacttgcgacaggaatctggtagacattctgaagcactggatgcaatcaccaaatatttg
gatatgggaacgtatagtgagtgggatgaagaaaagaaactggaattcctaacaagagag
ctcaaaagcaagaggccactagttccttccaccatccaggtcactcctgatgtcaaagaa
gttttggatacattccgcgttgctgctgagctagggagtgattcgcttggagcatatgtg
atctctatggcatccaatgccagcgatgtccttgctgtggagcttttacaaaaagatgcc
cgtcttgctgttagtggtgagctagggaaaccatgtcctggaggaacgctgcgggtggtt
cctttgtttgaaactgtgaaagatcttagaggggctggtttggttatcaggaaattatta
tcaattgattggtactcagagcacattataaagaaccatagcgggcatcaggaggtgatg
gttggatattctgattctggtaaagatgctggacgcttcactgctgcatgggaactttac
aaagcccaagaggatgttgtggcagcatgcaaagataatcagattaaagtaactctattc
catggacgaggagggagtattggccgtggtggtggaccaacatatcttgccattcaatcc
cagccaccaggttcagtaatgggtactcttaggtctactgagcaaggagaaatggtgcaa
gccaaatttgggctgccacacacggctgtcagacagttggagatatacacaactgcagtt
ctacttgcaacgttaaaacccccagaacgacctcgagaagaaaaatggcgtaatctcatg
gacgagatttcaaaaatcagctgccaaagttaccggagcacggtatatgaaaacccagag
tttcttgcctactttcatgaggctactccacaagcggagcttggtttccttaacatagga
agccgacccacaagaagaaagagctcaacgggaattggacatcttcgtgccattccatgg
gtatttgcctggacccaaacaagatttgttcttccagcatggcttggagttggggcaggt
ttgaagggtgtttgtgagaagggacacacccaagatttgaaagcaatgtacaaagaatgg
cctttcttccaatctactatagatcttatagagatggttttggggaaggcagacgttcct
atagcgaagcactacgatgaagtccttgtatctgataagagcaggagagaacttggtgct
gcactaagaagagaactcttaacaacggagaagtttgtattggtggttagtgggcatgag
aggctatcagaaaacaaccggagcttgaggaggctcattgagagcaggctcccttatctc
aatccaattaatatgttgcaggttgagattctaaagaggttgagaagcgatgatgacaat
cataaactcagagatgcactgcttattactataaatggtattgctgctggtatgaggaac
acgggctga
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