Populus trichocarpa (black cottonwood): 7485949
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Entry
7485949 CDS
T01077
Name
(RefSeq) nuclear matrix constituent protein 1
KO
K27866
protein CROWDED NUCLEI
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
7485949
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
7485949
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
7485949
NCBI-ProteinID:
XP_002312374
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Position
8:complement(7310561..7319164)
Genome browser
AA seq
1224 aa
AA seq
DB search
MFTPQRRPSPAITLTPRSEMHRSGGANAGATSTGIGAKGKALALIDGALPPPPPVGSLSV
NAGELDTEDVEAWRRFREVGLLDEAAMERRDREALLEKASRLEKELFDYQYNMGLLLIEK
KEWTSKYEELRQAWAETEEILKREQAAHLIALSEVEKRQENLRKALSVEKQCVGELEKAL
HDLQEEHVLIKKVSDSKLADAKALAAGNEEKSLEVEEKMRVAESKLAEVNMKSSELDMKL
NQLEARENLLQRERLSFNTEREAHKATFYKQREDLQEWEKKLRQGEESLCELRRTLNQRE
EKASEDERVLKKKERDLEEAEKKIDISFAKLKEREVDVNNRLLGLVTKEKEADSLRSTLE
IKEKELLALEDKLSARERVEVQELLDEHRTILDAKIQEADLELTEKRKNLEEELRSKADG
VRLLETEIFHREEKLGKRELALDRKSDRMKDKEKDLDAKLKVVKEKDKSMKAEQKQLELQ
KKQLLSDEVSVQLLEDDCEKLRAEIAQQELQIGEESESIKITNNERLEYLRLQAELKQEL
EKCRRQAEFLLKEAEELEQERERSEKEREVLEEKRAQINKEQKDIVEERERLEKMKYAGG
ESLKKEENDMQEYAQRELEAIRLEKESFEARKRHEQLVLSEKAENVHIQMVQDFESERCN
FETGLINRQEEMEKALRGRERAFEVLKERELNTINNLKEVARREREEIESERRAMDKERQ
EVVKNKEKLEEQQYGIKKDIDELGMLSNKLRKQREQVIRERNYFLSFVEKHKSCTNCGDV
TREFVLSDLQPPEMEERETLPSPKISDEFFRNNEGGADASDILNIKRPLSEDLGSNSQGR
MSWLRKCTSKIFSISPTRKIQHVSAPAFEGGFPSSPVRADMEERVEGSAVQKAITSSSIP
VDQAQVSFGTADDTVDIQHPQSDGIKRDAGGGYSVSVDDQSYMDSKTQDLPEDSELSELK
NRRHKPGRRQKSGPGRTRSIKAVVEDAKLFLGESLKETEYNSSVQPNDISRNSDESRGIN
VTKKSDVARKRQRLPTEREQDAGDSEGHSESVTTGGRRKRQQIVAPEEPTPGQKRYNLRR
HKIAGLTAATQASSDLMKGEKTADGAAAVEPIRNPETASGLSLGVTSENNKSTDVVQVTT
LKSVELSQDKVVRFQTTDVDYQAEAAKSVGITELSEEVNGIPDFEDEAENGSTVHEDEDD
YDEDELQHPGEVSMGKKIWTFFTT
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgtttacgccacagaggaggccgtcgccggcaatcacgctaactcctcggagtgagatg
cacagaagtggcggggccaatgcgggggccactagcactggaattggggcaaagggcaag
gcgttggcgttaattgacggggcgctcccgcctccaccgccagtgggatcgctgagtgtg
aatgcaggggagctggatacggaagatgtggaggcttggaggaggtttagagaggtgggt
ttgttggatgaggctgctatggagagaagggaccgtgaggcgcttctagagaaggcatcg
aggcttgaaaaggagctttttgattatcaatataacatgggcctcctccttattgagaaa
aaagagtggacttcaaagtatgaagaactaaggcaagcatgggcagaaactgaagaaatt
ctcaaacgtgaacaggcagcgcacttaattgctttatctgaagttgagaaacgacaggaa
aacttaagaaaagcattgagtgttgagaagcagtgtgtgggtgaacttgaaaaggctttg
cacgacttgcaagaggagcatgttctaatcaagaaagtttctgactcaaagttggctgat
gcaaaagctttggctgctggaaatgaggagaaatctctggaggtagaagaaaagatgcgc
gttgctgaatccaagcttgctgaagttaacatgaaaagctcagagctggatatgaaatta
aatcagttagaagctcgtgaaaacttgcttcagagggagcgcctctcctttaatacagaa
cgagaagcacacaaggcaactttctataaacagagagaagacttgcaagaatgggagaag
aaactacgtcaaggggaagagagcttatgtgagctccggaggacccttaaccagagagag
gaaaaggcaagtgaagatgagagggttcttaagaagaaggagagggatcttgaagaggca
gaaaagaagattgatatatcatttgctaagttgaaggagagggaagttgatgtaaataat
cggctgttgggcttggttacaaaagagaaggaagctgattctctgagaagcaccctagag
attaaagagaaggaattgcttgctttggaagacaagctcagtgctagagaaagagtggaa
gtccaagagctccttgatgagcataggaccattcttgatgctaaaattcaggaggctgac
ttggaattgacagagaaaaggaagaatcttgaagaagaattgagaagcaaggctgatgga
gtgaggctgctggaaacagaaatctttcacagagaagaaaagttgggaaagcgagagcta
gctttggataggaagtctgataggatgaaggataaagagaaggaccttgatgcaaaattg
aaggttgtaaaggagaaagataagtctatgaaggctgagcagaaacagttggagctgcag
aagaagcaattgctttctgatgaagtaagtgtgcaactccttgaggatgactgcgagaag
ctgagggccgagattgctcagcaggagttgcagattggggaagagagtgaaagcattaaa
ataactaataacgagaggttagaataccttcgcttgcaggctgaactgaaacaggaacta
gagaagtgccggcgccaggcagagtttcttttgaaagaagctgaagagttggaacaggaa
agggagaggtctgagaaggagagggaagtgctggaagagaaaagagctcaaattaacaag
gagcagaaggacattgttgaagagagagagagattagaaaagatgaagtatgctggaggg
gaaagcctgaaaaaagaggaaaatgacatgcaggagtatgctcagagagagttggaggct
attagactagagaaagaatcgtttgaagccagaaagaggcatgaacaattggttttatct
gaaaaggctgaaaatgtgcacattcaaatggttcaagactttgaatcagagagatgtaat
tttgagactggcttaataaataggcaggaagaaatggagaaagcactgcgaggaagggaa
agggcgtttgaggtgctgaaggagagagaacttaacaccattaacaacttaaaagaagtt
gcacgcagggaaagggaagaaatagagtctgaaagacgtgcaatggacaaggaaagacaa
gaagttgtaaaaaacaaggagaagctagaagaacaacaatatggaattaagaaggacatt
gatgagcttgggatgcttagcaataagcttcggaaacaaagagagcaggttatcagagaa
agaaactactttctttcatttgttgagaagcacaagagttgcacgaattgtggagatgtt
actagggagtttgtactttctgatctccagccaccggagatggaagaaagagagaccctt
ccttcaccaaaaatatctgatgaatttttcaggaataatgaaggtggtgcagatgcttct
gatattctgaatatcaagagacccctcagtgaagatttgggatccaactctcagggacgc
atgtcgtggctccgcaaatgcacctcaaagattttcagcatttctcctactagaaagatt
cagcatgtttctgctccagcatttgagggagggttcccttcatcacctgtgcgtgctgat
atggaagaaagagttgagggatctgctgtgcaaaaagctatcacatccagttctattcct
gtagatcaagcacaagtgtcctttggtactgcagatgatactgttgacattcagcatccc
caatctgatggaataaaaagagatgcaggtggtgggtattctgtgtctgttgatgatcaa
agctatatggatagtaagacacaggacctgccagaagattctgagctgtcagagctgaag
aacagaaggcataaacctgggaggagacagaagtctggaccaggcagaacaaggtcaata
aaggcagtggttgaggatgcaaagttgtttcttggggaaagcctcaaagaaactgaatat
aattcaagtgttcagcctaatgatatttctcgtaacagtgatgaaagtcggggtataaat
gttactaagaaatcagacgttgcaagaaagcggcaacgtctacctacagaaagagagcag
gatgccggtgacagcgaaggacactctgagagtgtcactactggtgggcgcaggaagagg
caacaaatagtggctccagaagagcctactccagggcaaaaacgatacaatcttcgacgc
cacaagattgcaggcttgaccgcagccacccaagcatcatctgacttgatgaagggcgag
aaaacagctgatggtgctgctgctgtggaaccgattcgaaacccagaaactgcttctggg
ctgtcacttggagtcactagtgagaataacaaatccaccgacgtggtgcaggttactaca
ctaaaaagtgtggagttatcacaggacaaggtggtcaggttccaaacaacagatgttgat
taccaagctgaggcagcgaaatcagttggaattacagagttgagtgaggaagtaaatggg
ataccagatttcgaggatgaagctgaaaatggcagcacagtgcatgaggatgaagatgac
tatgatgaagatgagttgcagcatcctggtgaagtttcaatgggaaagaagatctggacc
ttcttcactacatag
DBGET
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