Populus trichocarpa (black cottonwood): 7486030
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Entry
7486030 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7486030
KO
K13130
gem associated protein 2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7486030
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
7486030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIP1
Motif
Other DBs
NCBI-GeneID:
7486030
NCBI-ProteinID:
XP_052310664
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All DBs
Position
7:14084637..14089635
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AA seq
749 aa
AA seq
DB search
MADDTSVGSKRRITEIEEESLLQQQQKDHSCSFFSTFSPQGDSILSPTKAVQEEANHQDN
PSPTSFKKVKSSCLTESDTSFREKQGVGFEENGVKFDFLNEKNVAFCGLVPGSSESGELD
EKIESSGAKVKETENSVDGGLKKGEVEWSVDDAKEVKEKGKDFVGSECFEAEMGLGTDDN
KESVKVKESGGESLLEAKKQLLEELEVGSIFKNKTSVDNNVDDFDTNVGVSGSLKGFGES
VRRSLKFELIDDTVLIEPVSETETANGGANVAERNGKKNGKQGTDGKKEKRPRRRGKVAT
RGLETSEGQKKVTQVGEAQNRTIHVGEIRDRCATDGDQMKRKYSRVEMEALRFANIVEQR
KLWRDVYTGLGYDVVEGYKDLASSKHQKNVCLNFNPLEPFGRKEPDILGEESSENVDDGL
ENMEGDGVQNVDLLNPACSSSIEGEGAATLLVEEYDEEDDSDDDYASIQRPAFAVEGEPD
FDSGPPEDGLEYLRRVRWEAAHIPKVKVAKLDRSRVNKEQTVYMPQIPDIAKCPEYLLPS
RQWEDVFLADFSELRLLFSQNDGPSTKISHKMQPAAIVHGSCSPQLSESVIVEKFNNLRT
DEVQSYKQPDTSSSESIIDQLCMENREDRRSLTPSQHQTPEASSSDALCNYPTLPVILAM
DSVARVSMLRRCIKLAETTDALSKNDCVWLFALCAAVDAPLDAGTCAALRGLLRKCASLR
AGKSELDDEVIMLNILATISGRYFGQSES
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatacatcagttggttccaaaagaagaatcacagagattgaagaagaatct
ctccttcaacaacaacaaaaagaccactcttgttcttttttctctacattctctcctcaa
ggagactcaattctttcacctacaaaagcagtccaagaagaagccaatcatcaagacaat
ccaagcccaacgtctttcaagaaggtaaagagctcttgtttaactgaatctgatactagt
ttccgagagaaacaaggagtgggttttgaagaaaatggagtaaagtttgattttttgaat
gaaaagaatgttgctttttgtggactggttcctgggtcttctgaaagtggagagttggat
gaaaagattgagagttctggtgcgaaagtgaaagaaactgagaattctgtggatggtgga
ttaaagaaaggagaggttgaatggagtgttgatgatgcgaaagaagtgaaagagaagggg
aaagattttgtgggaagtgaatgttttgaggctgagatgggcttgggtactgatgataat
aaagagtctgtgaaggtgaaagaaagtggaggagaaagtttattggaagcaaagaagcag
ttactggaagaacttgaagttggttcaatctttaagaacaaaaccagtgtggataacaat
gttgatgattttgatactaatgtgggagtctcgggaagtctcaaaggatttggtgaatct
gttagacgttctttgaagtttgaattgattgatgatacagtgttgattgaaccagtttca
gagaccgaaactgctaatggtggtgctaatgttgctgagaggaatggaaagaagaatggg
aaacagggaactgatggaaagaaggagaaaaggccacggagaaggggaaaggttgcaaca
aggggtttggagacgagtgaagggcaaaagaaagtgacccaagttggtgaagctcaaaat
agaacaatccatgttggtgaaattcgagatagatgtgcaacagatggggatcagatgaag
aggaagtactcgagggtggaaatggaggccctgaggtttgcaaatattgtagaacagaga
aaattatggagagatgtatacactggacttggatatgatgtcgtggaggggtataaagac
ttggcaagttcaaagcatcagaagaacgtttgcttgaacttcaatcccctggagcctttc
ggaaggaaggaacctgacattcttggggaagaatcatctgaaaatgtggatgatggatta
gaaaacatggaaggagatggggtgcaaaatgtggatctattgaatcctgcttgcagtagc
agtattgagggtgaaggtgctgctacacttttggtggaagagtatgatgaagaagatgac
agtgacgatgattatgctagcatacagagacctgctttcgctgtagaaggagaaccagat
tttgattctggacctccagaggacggattagaatacctcaggcgtgtcaggtgggaggct
gctcacattccgaaagttaaagtagccaagcttgataggagtagagttaacaaagaacaa
actgtttatatgccccagattcctgacattgccaagtgcccagaatatttactcccgtca
aggcagtgggaggatgtgtttcttgctgatttttcagagctgcgattgttattctctcaa
aatgacggtcccagcactaaaatttcccataagatgcaaccagcagctattgttcatggg
agttgttcccctcagctttctgaaagcgttattgtcgaaaaattcaataaccttagaact
gatgaagtccaatcctataaacagcccgacacttccagctctgagagcatcattgatcag
ctatgcatggagaatcgtgaagatcgtagaagcttaacaccttcccagcatcaaactcct
gaagcttcgtcgagtgatgctttatgcaactaccctaccttaccggtcattttagctatg
gatagtgttgctcgagtttccatgctgaggcggtgcataaaattggcagaaactacagac
gcattgtccaagaatgattgtgtgtggctgtttgccttatgtgcagcagttgatgctcca
ttagatgctggcacgtgtgctgctcttcgtggtctcctccggaaatgcgctagcttgcga
gctggcaaatctgaacttgatgatgaggttatcatgctgaatattcttgccacaatttca
ggcaggtatttcggtcagtctgaaagctga
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