Populus trichocarpa (black cottonwood): 7486332
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Entry
7486332 CDS
T01077
Name
(RefSeq) nuclear transcription factor Y subunit B-3
KO
K08065
nuclear transcription Y subunit beta
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7486332
Transcription factors [BR:
pop03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
7486332
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
7486332
NCBI-ProteinID:
XP_002306345
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All DBs
Position
5:5738805..5739745
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AA seq
224 aa
AA seq
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MTGKGTQSSPIGSPSSENISDSSSKLEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQ
ECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGSLKVYLNKYRETEGE
KNSMARQEDQLSPTNHGTVGTHETNKVNGTLTDPSTEMDLQSFNNGLYSLGTEVTAKSYG
ENTRLLGYQENFMAGDFNMNRIGENGDRNSERARAAQLYHGVRW
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgactgggaaagggacccaaagcagcccaattggaagcccctcgtctgagaacatctca
gacagctcttccaaattagagcaagaccgattcctccccatcgccaacgtaagccggatc
atgaaaaaatcgctcccagcaaatgcaaaaatatccaaagaagccaaggaaactgtccaa
gagtgtgtctctgagttcataagtttcatcactggcgaagcatccgacaagtgtcaacga
gagaagaggaagactataaacggtgatgatcttttgtgggctatgaccacactagggttt
gaaaattatgttgggtccttgaaggtttatctcaacaagtatagagagaccgagggagag
aaaaattccatggctagacaagaagaccagttgtcccccaccaaccatggcactgtcggt
actcatgaaactaacaaagtcaatggtactcttactgatccgtcaactgagatggatctt
caaagttttaacaatggactctactcacttggcacagaagttacagccaagagctatggg
gaaaacacaaggctccttggctatcaagagaattttatggctggtgatttcaacatgaat
aggataggcgaaaacggagacaggaatagcgagagagctagggcagctcagctttatcat
ggggttcggtggtag
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