Populus trichocarpa (black cottonwood): 7486339
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Entry
7486339 CDS
T01077
Name
(RefSeq) ABC transporter F family member 5
Organism
pop
Populus trichocarpa (black cottonwood)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
SMC_N
AAA_21
AAA_29
AAA_22
AAA_16
AAA_14
AAA_18
DUF5906
AAA_28
ATP-synt_ab
NACHT
G-alpha
AAA_15
AAA_23
Peptidase_C14
Rad17
ATPase_2
Motif
Other DBs
NCBI-GeneID:
7486339
NCBI-ProteinID:
XP_024458023
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Position
5:5851334..5857479
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AA seq
703 aa
AA seq
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MDLSTKFHSTFFTGATLFNPQQKTSLLKPNPSLLSTKFTINNTNSFNFPTRRPNSKIKAR
LSTATVETSVAEPETDIESLFSSNSDVDFDKNRLRKQSNRGASGISSGIKLENISKSYKG
VTVLKDVTWEVKKGEKVGLVGVNGAGKTTQLRIMTGLEEPDSGNVIKAKANMKIAFLSQE
FEVSMSRTVKEEFMSAFKEEMEIAKRLEKVQKAIEGSVEDLELMGRLLDEFDLLQRRAQA
VDLDEVDAKISKLMPQLGFSPEDSDRLVAAFSSGWQMRMSLGKILLQDPDLLLLDEPTNH
LDLDTIEWLEGYLQKQDVPMVIISHDRAFLDQLCTKIVETDMGVSRTFEGNYSQYIISKA
EWVEAQLAAWEKHQREIEHTRDLISRLGSGANSGRASSAEKKLERLQEEDQIEKPFQRKQ
MKIRFPERGRSGRSVVAIRNLEFGYEDKVLFNKTNLMIERGEKIAILGPNGCGKSTLLKL
IMGLEKPSRGEIVLGEHNVLPNYFEQNQAEALDLDKTVLQTVEEVAEDWRLDDIKGLLGR
CNFKVDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY
KGTVITVSHDRYFIKQIVNRVVEVKDGKLQDYAGDYNYYLEKNLDARVRELEREAELEDK
APKVKAKSKMSKAEKEARKKQKMQTFQAAKQKSKGLKNSKRWN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtccactaaattccactctaccttcttcaccggcgcaacccttttcaatcct
caacaaaaaacctcacttcttaaaccgaacccatctctcttatccactaaattcactata
aacaacactaattcattcaacttccctaccagaagaccgaattctaaaatcaaagcacgc
ttatcaacggccacggtagaaacatctgttgccgaacccgaaaccgacatagagtcattg
ttttctagcaattcggatgttgatttcgacaagaaccgcttaagaaagcaatcaaaccgt
ggggcttcagggatatcttcaggtattaagctagaaaatataagcaagagttataaaggt
gttactgttttgaaagacgtgacttgggaagtgaaaaagggtgagaaagttggattagtt
ggtgtaaatggagcaggcaaaacgacccagttgagaattatgactgggctagaggagcct
gattcaggaaatgtgattaaagccaaagctaatatgaagattgcgttcttgagtcaagag
tttgaagtttctatgagtaggactgtgaaggaagagtttatgagtgcttttaaagaggaa
atggagatcgctaagagattggagaaggtgcaaaaggctatagagggatctgtggaggat
ttggagttgatggggaggttattggatgagtttgatttgttgcagagaagagcacaagct
gtggacttggatgaagttgatgcaaagattagtaagttgatgcctcagctcggtttttcc
cctgaggattcggataggttggtggctgctttcagtagtgggtggcagatgaggatgtcg
cttgggaagattttgctgcaggacccagatttgttgcttttggatgaacccacaaatcac
cttgaccttgacactattgagtggcttgaaggttatctccagaagcaagatgtgccgatg
gtcatcatatctcatgacagagcctttcttgatcaattgtgtacaaaaattgtggaaact
gatatgggtgtgtctaggacatttgagggaaattattctcaatacatcatatcaaaagca
gaatgggttgaagctcagcttgctgcttgggagaagcatcaaagggaaattgagcacacg
agagatttaataagtaggctaggttcaggagcaaactctggccgtgcttcttctgctgag
aagaaactggagagacttcaagaagaggatcaaatagagaagccatttcaacgcaaacaa
atgaagatcaggttcccagagcgtgggagaagtggaagatctgttgttgcaattaggaat
ttggaatttggttatgaggataaggtgctttttaataagacaaatctcatgatagaaaga
ggagaaaaaattgctattcttggtccaaatggatgtgggaagagtactttactgaaactg
atcatgggtttagagaagccaagtagaggtgaaattgtgcttggggaacataatgtacta
ccaaattattttgagcagaaccaggctgaggcacttgatttagataaaacagtacttcaa
acagtggaagaagttgcggaggactggagacttgatgatataaagggactccttggtcgt
tgtaacttcaaagtggatatgcttgatagaaaggtttcacttttgagtggtggagagaag
gcacgcctagcattttgcaaattcatggttaaaccttcaactttattagttctggatgaa
ccaactaatcacttggatataccttcaaaagagatgcttgaggaggccatatcagaatac
aaaggtacagtcatcacagtttctcatgaccggtatttcataaagcaaatagttaataga
gtagtggaagttaaagacggcaagttacaggattatgcaggcgattacaattattatctg
gagaaaaatctggacgcaagggtgagagagcttgaacgcgaagcggagcttgaggacaag
gctcccaaagtaaaggccaaatccaagatgtcgaaggctgagaaggaagctcggaagaaa
caaaaaatgcagacctttcaggctgccaaacaaaagtcaaaagggttgaagaattcaaag
agatggaattga
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