Populus trichocarpa (black cottonwood): 7486486
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Entry
7486486 CDS
T01077
Name
(RefSeq) isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial
KO
K00030
isocitrate dehydrogenase (NAD+) [EC:
1.1.1.41
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00020
Citrate cycle (TCA cycle)
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
pop01210
2-Oxocarboxylic acid metabolism
pop01230
Biosynthesis of amino acids
Module
pop_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
7486486
Enzymes [BR:
pop01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.41 isocitrate dehydrogenase (NAD+)
7486486
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Gene cluster
GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-GeneID:
7486486
NCBI-ProteinID:
XP_002322885
UniProt:
B9IFP1
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All DBs
Position
16:7469265..7471851
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AA seq
363 aa
AA seq
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MALVQVLRRVLGASGSTQISSTARAFSSAPAPIIATLFPGDGIGPEIAESVKQVFQAAEV
PIEWEEHYVGDQIDPRTQSFLTWESLESVRRNRVGLKGPMATPVGKGHRSLNLTLRKELN
LYANVRPCYSLPGYKTRYDNVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQASLRV
AEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCCMML
VKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEAGIALAEAVHGSAPDIAGK
NLANPTALLLSAVTMLRHLELYDKAERIQDAILNTIAEGKYRTADLGGSSSTTDFTKAIC
GHL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcccttgtgcaggtgttgaggcgcgttcttggtgcaagcggctccacccagatctcc
tcaacggctagggctttctcttctgctccggctcccatcatagccactctctttcccggt
gacggtatcggccccgagatcgccgagtccgtcaaacaggtgtttcaagcagctgaggtg
ccaattgagtgggaagagcactatgttggggatcaaatagatccaagaacccagagtttt
ctgacatgggaaagtctggagtctgtacgaagaaacagggttggcttaaaagggccaatg
gccacaccggttggaaaaggccatcgttccttgaaccttactcttaggaaagagcttaat
ttgtatgccaacgttaggccttgctacagcctccctggttataaaactcggtatgataat
gttaatcttatcactattcgtgagaatacggaaggagaatacagtggacttgaacaccaa
gtggtgagaggtgtagttgaaagtctcaaaatcattacccgtcaggcaagtttgagagtt
gctgaatacgcttttcactatgcaaagacccacggacgagagagagtatcagctatacac
aaagctaatattatgcagaaaactgatggtctttttctcaagtgctgtcgtgaggttgca
gagaagtaccctgaaatcacatatgaagaagttgttattgacaactgctgtatgatgctt
gtgaagaatccagctctttttgatgtactggtgatgcctaacctctatggtgacattatc
agtgacctttgtgcggggttggttggtggtttgggcttaacaccaagctgcaatattggt
gaagcaggaattgcccttgctgaagctgtgcatggttctgcacctgatattgctggcaag
aatttggcaaatcccactgctctactgttaagtgctgtcacaatgttacgccatttagag
ctctatgacaaagcggagaggatccaggatgccattcttaacacaattgccgagggaaag
tatcggactgcagaccttggtggttcttcatcgacaactgattttacgaaggcaatctgt
ggtcatctttga
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