Populus trichocarpa (black cottonwood): 7486508
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Entry
7486508 CDS
T01077
Name
(RefSeq) vacuolar protein-sorting-associated protein 37 homolog 1
KO
K12185
ESCRT-I complex subunit VPS37
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7486508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7486508
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7486508
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
7486508
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
7486508
Exosomal proteins of colorectal cancer cells
7486508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
APG6_N
GlutR_dimer
Pesticin
Motif
Other DBs
NCBI-GeneID:
7486508
NCBI-ProteinID:
XP_002323492
UniProt:
B9IFT3
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All DBs
Position
16:complement(9665367..9668692)
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AA seq
230 aa
AA seq
DB search
MFKFWGNQEQQEQARPQDVNPAQSWYPPSVVTSPSSSRPATPTSSSSSSHSLQRPTERPL
SPSPAEAAAIITLLKDKSVDELRKLLSDKDAYHQFLLSLDQVKIQNNIRDELCKETLQLA
RENLEKEPRIMELRNQCRIIRTTELAAAQEKLNELEKQKEELLRSCSPASILQRLQEAMN
KTEEESDAFHRQFLEKEMDLGAFVQKYKKLRTTYHKRALIHLAAKASPTG
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagttctggggtaatcaggaacaacaagagcaggcgcgtccacaagatgttaat
cctgcacaatcttggtaccctccatctgtagttacttctccttcttcttcacgccctgca
acaccaactagtagttcttctagttcccacagcttacaaaggcctactgaacgcccactc
tctccttcacctgctgaagctgctgccattattactcttttgaaggacaagagtgttgat
gagctacggaagctattgtctgataaggatgcataccatcaatttttactttcacttgac
caggttaaaattcaaaacaatataagagatgagctttgcaaggaaactctgcagcttgcc
agagagaacttggagaaagagccacgcataatggagctaagaaatcaatgcaggataatt
cggacaactgagctggctgctgctcaggaaaaactaaatgagctagaaaaacagaaagaa
gagttgttgaggtcctgctctcccgcctccatcctgcaaaggctacaagaggcaatgaat
aagacagaggaggaatctgacgccttccataggcagttccttgaaaaggagatggatctt
ggggcttttgtgcagaagtacaaaaaactccgtaccacctatcacaaacgagcactcatc
catcttgcagcaaaagcatctccgactgggtga
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