Populus trichocarpa (black cottonwood): 7486625
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Entry
7486625 CDS
T01077
Name
(RefSeq) pleiotropic drug resistance protein 1 isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
7486625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
7486625
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
7486625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
ABC_trans_N
AAA_21
AAA_25
AAA_29
AAA
AAA_16
ABC2_membrane_3
AAA_28
nSTAND3
DO-GTPase2
DnaB_C
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
7486625
NCBI-ProteinID:
XP_002298123
UniProt:
B9GL02
LinkDB
All DBs
Position
1:15108302..15116143
Genome browser
AA seq
1449 aa
AA seq
DB search
MESGYLYRAGSSVRRGNSSGTFSNNAAADHQVFSLSSHGQDDDEEALKWAALEKLPTYDR
LRKGILTTSTGAASEVEVQNLGFQERKNLVERLVNVAEEDNEKFLLKLKNRIDRVGIHVP
TIEVRFEHLNVEAEAYVGSRALPTFFNYSVNMLEGVLNYLHILSSRKKHMWILKDVSGII
KPSRMTLLLGPPSSGKTTLLLALAGKLDHALKFSGRVTYNGHEMDEFVPQRTAAYISQHD
LHIGEMTVRETLAFSARCQGVGSRYDMLAELSRREKEAGIKPDPDIDVFMKAAATEGQED
SVVIDYILKVLGLEVCADTLVGDEMLRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLD
SSTTYQIVNSIKQYVQILEGTALISLLQPAPETYDLFDDIILLSDGEIVYQGPREHVLRF
FEYMGFKCPARKGVADFLQEVTSRKDQMQYWARRDVPYRFVTVKEFAEAFYSFHEGKRLG
NELAVPFDKSKNHPAALTTKKYGVNKRELCKASFSREFLLMKRNSFVYAFKFIQLTIVAV
IAMTLFLRTEMHRDSVTDGGIYVGAMFFIVVVIMFNGMAEISMTLAKLPVFYKQRDLLFF
PAWIYALPTWILKIPITFIEVAIMVFITYFVIGFDPNVGRLFKHYLVLLLTNQMASGLFR
TIAAVGRNMVVANTFGSFVLLLLFVLGGFVLSRDDIKKWWIWGFWTSPMMYAQNAVVVNE
FLGKSWNHVLPNSTEPLGIEVLKSRGFFTEAYWYWLAVAALFGFTLLYNFLYILALAFLN
PLGKPQQAGISEEPQSNNVGRIGEAIHLMNPGINSSLHTSAESIDEIGRSKSSRFTCNKQ
RGVIIPFEPHSITFDKVMYSVDMPQEMKSHGVHEDKLVLLKGVSGAFRPGVLTALMGISG
AGKTTMMDVLAGRKTGGYIEGNITISGYPKKQETFARISGYCEQNDIHSPHITVYESLLY
SAWLRLPTEVDIETRKMFVEEVMELVELNPLRQALVGLPGVDGLSTEQRKRLTIAVELVA
NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLLKRG
GQEIYVGPLGRLSCHLIKYFEGIEGVNKIKDGYNPATWMLEVTSTAEELALGVDFAEIYR
SSELFRRNRALIKDLSTPAPGSKDLYFSTQYSRSFFTQCLACLWKQHWSYWRNPPYTAIR
FLSTTVIGLIFGTMFWDIGSKITKRQDLFNAMGSMYTAVLFLGVQNAASVQPVVAVERTV
FYRERAAGMYSALPYAFAQVLIELPYIFVQAAVYGVIVYSMIGFGWTISKFFWYLYFMYF
TLLYFTFYGMMAVAVSPNHQIASVISAAFYGIWNVFSGFVIPRSRMPLWWRWYSWICPVF
WTLYGLVASQFGDMKDRLETGETVEQFVTIYLDFKHDFLGVVAAVILGFTVLFAITFAIS
IKLFNFQRR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtggttatctttacagagccggtagcagtgtaagaagaggaaactcttcagga
acatttagtaacaatgcagctgcagatcatcaagttttttcactttcttctcacggacaa
gacgacgatgaagaggctttaaaatgggcggcattagagaaactaccaacctatgatcgt
ttgaggaaaggtatattaaccacgtccacaggtgctgctagtgaagtggaggtgcagaat
cttgggttccaagaaaggaagaatttggtggagaggttggtcaatgtagcagaagaggac
aatgagaagttcttgttaaagctcaagaaccgtattgatagagttggaattcatgttccc
acaattgaagttcgattcgagcatctaaatgttgaagcagaagcctatgtaggaagtaga
gctttgcctacattctttaactactctgttaatatgctggagggtgtcttgaactatctc
catattctttctagtagaaagaaacatatgtggatccttaaggatgttagcggtatcatc
aagccatcgagaatgacattgcttttgggccctccaagttccggaaagacaacgcttttg
ttagctttggctggaaagcttgatcatgctctaaagttttcagggagggtgacttataat
ggtcatgaaatggatgagtttgtaccgcaaagaactgctgcctatatcagtcaacacgat
ctgcatataggagaaatgactgtaagggaaaccttggccttttctgcaagatgccaaggg
gttggaagccgttatgatatgttagcagaattatcgagaagggagaaagaagcggggatc
aaacctgatcctgatattgatgtcttcatgaaggctgcagcgacagaaggtcaggaggac
agtgtggtgatagattacattctgaaggttttaggactggaagtctgcgcggatacattg
gtcggggatgaaatgctgcggggtatttctggaggacaaaagaagcgtgttaccacaggt
gagatgctggttggaccagcaaaggcactgtttatggatgagatatctactggattggat
agctcaacaacgtaccagattgtgaactccatcaagcaatatgtccaaattcttgaggga
actgctctcatctctctcctccagccagcgccagagacttatgatctctttgatgacatt
attcttctctcagatggcgagatagtgtatcagggacctcgtgagcatgtcctcaggttt
tttgaatatatgggcttcaagtgtcctgcaaggaaaggtgtggcagacttcttgcaagaa
gtgacatcaaggaaagatcagatgcagtattgggcacgacgagatgtgccatacagattt
gtcacagtcaaagaatttgccgaggcattctattcgtttcatgaaggaaagagacttgga
aatgagcttgcagttccatttgataagagcaagaaccacccagctgctttgactaccaag
aaatacggagttaataagagagagctatgcaaagcttctttctcaagagaattcttactc
atgaaaaggaactcattcgtctacgccttcaagttcattcaactgacaatagtcgcagtg
attgcgatgacactctttctacggactgaaatgcaccgagactcggtaaccgatggagga
atttatgtgggcgctatgttcttcattgtggttgtgatcatgtttaatggtatggctgag
atttccatgacccttgcaaagcttcctgtgttctacaagcaaagggaccttctattcttt
cctgcttggatatatgctcttcctacatggatccttaaaatccctatcactttcatcgaa
gttgctattatggttttcattacgtattttgtcattggatttgatccaaatgtaggaagg
ttgtttaagcattacctcgtgctcttattaacaaatcagatggcttctggattattccga
accattgctgctgttggcaggaacatggttgttgctaacaccttcgggtcatttgtactt
ctcttgctgtttgttttgggtggctttgtcttgtcacgagatgacataaagaaatggtgg
atttggggcttctggacatcacccatgatgtatgcgcagaatgcagttgtcgtgaacgag
tttcttggaaagagttggaaccatgttcttccaaactcaacggagccattgggaattgaa
gttctgaagtctcgtgggttcttcacagaagcatattggtattggttagcagtagcagca
ttgtttggattcactctactatacaacttcttgtacattttggctctcgcttttctcaac
ccattaggaaagccacaacaggctggtatatcagaagaacctcaaagcaacaacgttggt
agaataggagaagccattcatttaatgaaccctggaattaactctagcctccacacaagt
gcagagagcatagatgaaattggaagaagcaagtcatcaaggttcacatgtaacaaacaa
aggggggtcattattccattcgaaccacattctataacgtttgataaagttatgtactca
gttgacatgccacaggaaatgaaaagtcatggtgttcatgaagataaattggtactgttg
aagggtgtgagtggcgcatttaggccaggtgttctcacagctttaatgggcatcagtggt
gctggtaaaaccacaatgatggatgttcttgctggtaggaaaactggtggatatattgag
gggaacatcacaatttctgggtatccgaagaagcaagaaacatttgctagaatatctgga
tactgtgagcaaaatgacatccactcaccacatattactgtctatgagtccttgctctac
tcagcttggcttcgtcttcccactgaagtagacattgaaactagaaaaatgttcgttgag
gaggtcatggagcttgtagaactgaatccattgaggcaagctttagttggattgcctggt
gtagatggtctgtcaactgagcaacggaagcgactaaccattgcagttgagctagtggca
aacccctcaattatttttatggatgaaccaacttcagggcttgatgcaagagcagctgct
attgttatgagaacagttaggaacacagtggacacaggaagaacagttgtctgcaccatc
catcaaccaagcattgacatatttgaagcttttgatgagttgtttctactgaagagagga
ggacaagagatatatgtggggccattgggtcgactttcttgccatctgatcaagtatttt
gagggaattgaaggagtcaacaaaatcaaagatggttacaatccggctacttggatgttg
gaagtgaccagtacagcagaagaattggctctgggggttgattttgctgaaatatataga
agttcagaattgtttaggagaaacagagctctcataaaggatttgagcactcctgctcct
ggttcgaaggacctctatttctctactcaatattcgcgatcatttttcacccagtgtttg
gcttgcttatggaaacagcactggtcgtactggcgcaaccctccatacactgctatcaga
tttctctctacaacagtcataggcttgatctttggaacaatgttttgggatattggctcc
aaaataacaaagcgacaagatctttttaatgcaatgggttcaatgtataccgctgttctc
tttcttggtgtccaaaatgccgcgtctgttcagcctgtggtagcagttgagcgaactgtc
ttttacagagagagagctgctggaatgtactctgccttgccgtatgcctttgcacaggtt
ctcattgagcttccatatatttttgtccaagctgcagtttatggtgttatagtctattca
atgattggattcggatggaccatctcaaagttcttctggtatctgtatttcatgtacttc
acgctactgtatttcaccttctatggcatgatggccgtggccgtgtcaccaaatcaccaa
attgcgtctgtaatttctgctgcattttatggaatctggaatgtattttcaggattcgta
atcccacgatctcggatgcctttgtggtggagatggtactcttggatatgtccagtcttt
tggaccctgtatggactggttgcctcccagtttggggatatgaaggatagacttgaaact
ggtgaaacagtggagcaattcgtgacaatttatttggatttcaaacatgattttcttgga
gttgttgcagctgtgattcttgggtttacagtcctttttgcaataactttcgccatttcc
atcaagctcttcaatttccaaaggcgatag
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integrated database retrieval system
