Populus trichocarpa (black cottonwood): 7486664
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Entry
7486664 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A isoform X1
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7486664
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
7486664
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
7486664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
RING_XB3-XBAT31
Trp_repressor
zf-Nse
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
7486664
NCBI-ProteinID:
XP_002299657
UniProt:
A0A2K2C1E8
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All DBs
Position
1:22083231..22088015
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AA seq
386 aa
AA seq
DB search
MEGIEERKKKSEAHLTVSAAAFVEGGIQEACDDACSICLENFCDSDPSTVTSCKHEFHLQ
CILEWCQRSSQCPMCWQPISLKDPMSQELLEAVEQERSFRLNPSRNATIFHHPALGDFEL
QHLPVGANDAELEERLIQHLTAAAAMGRRRIARREGQRNRSSAQGRPQFLVLSSQPNGSP
AGSISSSPTQREGEPVSAITIATPSSQPLESSLQLITPLSSEALADPCSASASGSSFTNQ
HANSMDNRSPNQSSPNSQDRAGPSDLQSFSESIKSKFNAVSMRYKESISKSTRGWKERFF
TRNTTMADLGSEVRREVNAGIATVSRMMESLETRDDSRTGTSSVSNSVDGSVAESNSQQP
EVGVVNATSDPNTKVQASHAASSGSV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagggaattgaagagaggaagaagaagagtgaagcacatttaacagtatctgctgca
gctttcgtcgaaggagggatacaggaagcgtgtgatgatgcttgcagtatttgcctggaa
aacttctgcgacagtgatccctcaactgtgaccagttgcaagcatgagttccacctccag
tgcattcttgaatggtgtcaaaggagttcccagtgccctatgtgttggcaacccatcagt
ttgaaggatcccatgagtcaggaattacttgaggctgtagaacaggagaggagttttagg
ttaaatccatcaagaaatgccaccatatttcatcatccagcccttggggactttgaatta
cagcatttgccagtgggtgcaaatgatgctgaacttgaagagcgtttaatacagcactta
actgctgctgcggcaatggggcggcgtcgtattgctagaagggaagggcagcggaacagg
tcatcagctcaaggtcgtccacagttcctagtactctcaagtcaacctaatggatcccct
gctggttcaatttcttcctccccaactcagagagaaggtgaacctgtttctgcaatcaca
atagcaacaccatcttcccaaccacttgaatcttctctacaactaatcacaccactgtct
tctgaagccctggctgatccatgttctgcttcagcttctggatccagttttaccaatcaa
catgcaaattccatggacaataggtctcctaatcagtcttctccaaatagtcaagacaga
gcagggccgtcagaccttcagtcattttcagagtctatcaaatccaaattcaatgcagtg
tcaatgagatataaagagtcgatttcaaagagtactaggggatggaaagagagatttttc
actcgcaatactaccatggcagatctaggttctgaagttagaagagaggtcaatgctgga
attgcgacagtatctcgcatgatggagagtctagaaaccagagacgatagtagaactggc
acctcttctgtatcaaacagtgtagacggttcagttgcagaatctaacagtcagcaaccg
gaggttggtgttgtcaatgcaacaagtgatcccaatactaaagtgcaagcttcacatgct
gcaagttctggctcagtttaa
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